RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 THEM4Q5T1C6 240 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 BTNL3Q6UXE8 466 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 PXKQ7Z7A4 578 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 DPPA2Q7Z7J5 298 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 ZNF781Q8N8C0 355 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 IPCEF1Q8WWN9 437 aaPredicted RBP18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 SLC47A1Q96FL8 570 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 SLC30A2Q9BRI3 323 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 NANOGQ9H9S0 305 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 CYSLTR2Q9NS75 346 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 DCAF16Q9NXF7 216 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 MRPL39Q9NYK5 338 aaKnown RBP18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 TRIM33Q9UPN9 1127 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 NBEAL2Q6ZNJ1 2754 aa18.36■□□□□ 0.53
CAPNS1-205ENST00000588780 TRAV40A0A0B4J280 105 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 CLPSL1A2RUU4 121 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 ZSCAN5BA6NJL1 495 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 MFN2O95140 757 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 IGHV2-70P01814 119 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 BGLAPP02818 100 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 BPGMP07738 259 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 MPV17P39210 176 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 ULK3Q6PHR2 472 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 WDR88Q6ZMY6 472 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 RHOUQ7L0Q8 258 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 NUDCD3Q8IVD9 361 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 HIPK4Q8NE63 616 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 TMEM54Q969K7 222 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 SLC35B4Q969S0 331 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 ZNF566Q969W8 418 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 MOGAT1Q96PD6 335 aa18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 POLR3KQ9Y2Y1 108 aaPredicted RBP18.35■□□□□ 0.53
CAPNS1-205ENST00000588780 LRRN3E7EW58 273 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 PLPP3O14495 311 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 DHHO43323 396 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 ITM2AO43736 263 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 CD80P33681 288 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 MMP15P51511 669 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 TNFAIP6P98066 277 aaPredicted RBP18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 UNQ6126/PRO20091Q6UXV3 157 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 LRRC18Q8N456 261 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 OR6S1Q8NH40 331 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 FAM110DQ8TAY7 271 aaPredicted RBP18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 NUF2Q9BZD4 464 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 MARCH7Q9H992 704 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 TMEM106BQ9NUM4 274 aa18.34■□□□□ 0.53
CAPNS1-205ENST00000588780 WDR91A4D1P6 747 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 C5orf58C9J3I9 102 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 NGFP01138 241 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 HTR2AP28223 471 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 LIPAP38571 399 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 TAF9Q16594 264 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 DEFB112Q30KQ8 113 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 ZMAT1Q5H9K5 638 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 ASPHD2Q6ICH7 369 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 C9orf139Q6ZV77 190 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 SLC35D2Q76EJ3 337 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 LSMEM1Q8N8F7 131 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 OR6X1Q8NH79 312 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 SLC25A40Q8TBP6 338 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 SLC19A3Q9BZV2 496 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 KCNN2Q9H2S1 579 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 TPT1P8Q9HAU6 139 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 TMEM27Q9HBJ8 222 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 MSL2Q9HCI7 577 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 SLC6A13Q9NSD5 602 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 THUMPD1Q9NXG2 353 aaKnown RBP18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 C1RLQ9NZP8 487 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 ZDHHC8Q9ULC8 765 aa18.33■□□□□ 0.52
CAPNS1-205ENST00000588780 SLC22A31A6NKX4 558 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 SRRM5B3KS81 715 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 QDPRP09417 244 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 IL12AP29459 219 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 RBMXP38159 391 aaKnown RBP18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 MVDP53602 400 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 PAX8Q06710 450 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 MELKQ14680 651 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 TMEM155Q4W5P6 130 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 SPRNQ5BIV9 151 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 LRFN4Q6PJG9 635 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 LRRN1Q6UXK5 716 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 NHLRC1Q6VVB1 395 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 CCNB1IP1Q9NPC3 277 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 IL20RAQ9UHF4 553 aa18.32■□□□□ 0.52
CAPNS1-205ENST00000588780 STOMP27105 288 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 RPL14P50914 215 aaKnown RBP18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 ZNF84P51523 738 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 CLRN1P58418 232 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 BTG1P62324 171 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 HLXQ14774 488 aaPredicted RBP18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 PDCD1Q15116 288 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 PABPC1L2AQ5JQF8 200 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 FAM91A1Q658Y4 838 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 BRD3OSQ6XYD6 125 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 OR10S1Q8NGN2 331 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 OR5J2Q8NH18 312 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 BBS10Q8TAM1 723 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 KLF14Q8TD94 323 aaPredicted RBP18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
CAPNS1-205ENST00000588780 OR2J1Q9GZK6 312 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms