RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 PRR23D1E9PI22 279 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 F8W036 122 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 F8W735 103 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 GABARAPH6UMI1 98 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 J3QRE1 110 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 J3QW42 95 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SURF4O15260 269 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SGTAO43765 313 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 KLHL18O94889 574 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR2A4O95047 310 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ETHE1O95571 254 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 EML2O95834 649 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 IGSF6O95976 241 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SERPINA3P01011 423 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GHRHP01286 108 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 STATHP02808 62 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MT-ND5P03915 603 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 HRGP04196 525 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 HIST1H2ABP04908 130 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ALDOBP05062 364 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CD1AP06126 327 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 LPLP06858 475 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 IGFBP1P08833 259 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 PRR23D2P0DMB1 279 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR12D1P0DN82 309 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GABRA1P14867 456 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 IFNGR1P15260 489 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RPA2P15927 270 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SRD5A1P18405 259 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CELP19835 753 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CXCL2P19875 107 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 XPAP23025 273 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 GIFP27352 417 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SERPINA4P29622 427 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FOLR3P41439 243 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FRKP42685 505 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 GIPRP48546 466 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ARL4DP49703 201 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SELENOPP49908 381 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 TNFSF10P50591 281 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RAB13P51153 203 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CCR9P51686 369 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ARFIP1P53367 373 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GPR85P60893 370 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RPS13P62277 151 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 ACTG1P63261 375 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ACTC1P68032 377 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ACTA1P68133 377 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 BCL2L1Q07817 233 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SSPNQ14714 243 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 TRAM2Q15035 370 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MLC1Q15049 377 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 STK11Q15831 433 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MPEG1Q2M385 716 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZNF791Q3KP31 576 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 CYP27C1Q4G0S4 372 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ATP13A5Q4VNC0 1218 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SYTL3Q4VX76 610 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZNF805Q5CZA5 627 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RPS26P11Q5JNZ5 115 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZNF626Q68DY1 528 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 LIN54Q6MZP7 749 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 NIPAL3Q6P499 406 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 AGTRAPQ6RW13 159 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GSG1LQ6UXU4 331 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 GLDNQ6ZMI3 551 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZNF620Q6ZNG0 422 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 HIST3H2AQ7L7L0 130 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 WDR53Q7Z5U6 358 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 BCDIN3DQ7Z5W3 292 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 PXKQ7Z7A4 578 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 C11orf96Q7Z7L8 435 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 TMPRSS11BQ86T26 416 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 KLBQ86Z14 1044 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RNF175Q8N4F7 328 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 RPRMLQ8N4K4 120 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 HORMAD2Q8N7B1 307 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 ZFP41Q8N8Y5 198 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 DTX3Q8N9I9 347 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR1M1Q8NGA1 313 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR5M9Q8NGP3 310 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR51Q1Q8NH59 317 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MOSPD2Q8NHP6 518 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 PIGXQ8TBF5 258 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 FANK1Q8TC84 345 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 SFXN5Q8TD22 340 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 C16orf78Q8WTQ4 265 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 THAP3Q8WTV1 239 aaPredicted RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 C15orf40Q8WUR7 153 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 CNOT9Q92600 299 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 NSMAFQ92636 917 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OSTF1Q92882 214 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 HIST1H2ACQ93077 130 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 MRPS24Q96EL2 167 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 ALG14Q96F25 216 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 PHYHIPLQ96FC7 376 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 THOC3Q96J01 351 aaKnown RBP3.75□□□□□ -1.81
LIG3-211ENST00000588713 SLC35G5Q96KT7 338 aa3.75□□□□□ -1.81
LIG3-211ENST00000588713 OR2A7Q96R45 310 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms