RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 WDR76Q9H967 626 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 PLSCR2Q9NRY7 297 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 MRPL22Q9NWU5 206 aaKnown RBP23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 RSL24D1Q9UHA3 163 aaKnown RBP23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 COPS3Q9UNS2 423 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 TP53TG5Q9Y2B4 290 aa23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 COA3Q9Y2R0 106 aaPredicted RBP23.13■■□□□ 1.29
SCAMP4-210ENST00000588555 CENPBD1B2RD01 187 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 SCG5P05408 212 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 BLVRAP53004 296 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 RPUSD3Q6P087 351 aaKnown RBP23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 ERI1Q8IV48 349 aaKnown RBP23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 RNF128Q8TEB7 428 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 ABHD3Q8WU67 409 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 GATAD2BQ8WXI9 593 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 FOXN4Q96NZ1 517 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 RBP7Q96R05 134 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 DOK1Q99704 481 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 PIEZO2Q9H5I5 2752 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 GLO1Q04760 184 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 MLLT11Q13015 90 aaPredicted RBP23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 CARD17Q5XLA6 110 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 SLC16A12Q6ZSM3 486 aa23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 ISG20L2Q9H9L3 353 aaKnown RBP23.12■■□□□ 1.29
SCAMP4-210ENST00000588555 BSNQ9UPA5 3926 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF701M0R085 212 aaPredicted RBP23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 NTF4P34130 210 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 RGS6P49758 472 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 RASGEF1BQ0VAM2 473 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 PLEKHN1Q494U1 663 aaPredicted RBP23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 CDC20BQ86Y33 519 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 ANKRD13BQ86YJ7 626 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 SPRYD4Q8WW59 207 aaPredicted RBP23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 INTS14Q96SY0 518 aa23.11■■□□□ 1.29
SCAMP4-210ENST00000588555 IGKV3D-15A0A087WSY6 115 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 KHDRBS3O75525 346 aaKnown RBP23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 LALBAP00709 142 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 GAAP10253 952 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 PSKH1P11801 424 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 CD36P16671 472 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 TMBIM6P55061 237 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 CXADRP78310 365 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 INAQ16352 499 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 SSX1Q16384 188 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 PLXDC2Q6UX71 529 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 SLC26A10Q8NG04 563 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 FNDC8Q8TC99 324 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 YIPF3Q9GZM5 350 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 PRDM14Q9GZV8 571 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 ISYNA1Q9NPH2 558 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 ENPP5Q9UJA9 477 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 MCTS1Q9ULC4 181 aaKnown RBP23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 RCE1Q9Y256 329 aa23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 DSPP15924 2871 aaKnown RBP23.1■■□□□ 1.29
SCAMP4-210ENST00000588555 AQP7O14520 342 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 SYNGR4O95473 234 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 SELENOPP49908 381 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 ACSM1Q08AH1 577 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 TSTQ16762 297 aaKnown RBP23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 LRFN4Q6PJG9 635 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 SLC25A47Q6Q0C1 308 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 C19orf48Q6RUI8 117 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 UNQ6494/PRO21346Q6UXR6 183 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 TMPRSS11AQ6ZMR5 421 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 FNDC9Q8TBE3 224 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 TMEM54Q969K7 222 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 MCHR2Q969V1 340 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF775Q96BV0 537 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 FOXD3Q9UJU5 478 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 ZMIZ1Q9ULJ6 1067 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 AQP8O94778 261 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 OTPQ5XKR4 325 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 P2RY8Q86VZ1 359 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 OR6N2Q8NGY6 317 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 CAMK2AQ9UQM7 478 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 KLHDC2Q9Y2U9 406 aa23.09■■□□□ 1.29
SCAMP4-210ENST00000588555 H3BMQ9 156 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 GABARAPO95166 117 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 HLA-DQA2P01906 255 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 CSNK1A1P48729 337 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 ZNF133P52736 654 aaPredicted RBP23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 HSF2Q03933 536 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 CNPY1Q3B7I2 92 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 CDONQ4KMG0 1287 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 DPY19L4Q7Z388 723 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 ATCAYQ86WG3 371 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 NSMAFQ92636 917 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 C12orf43Q96C57 262 aaKnown RBP23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 TTTY10Q9BZA0 68 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 GLTPQ9NZD2 209 aa23.08■■□□□ 1.29
SCAMP4-210ENST00000588555 PRR32B1ATL7 298 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 CCRL2O00421 344 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 AKAP8O43823 692 aaKnown RBP23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 MPZL1O95297 269 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 QDPRP09417 244 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 RPS27P42677 84 aaKnown RBP23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 MEP1BQ16820 701 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 PHYHD1Q5SRE7 291 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 GLB1L2Q8IW92 636 aa23.07■■□□□ 1.28
SCAMP4-210ENST00000588555 RAB2BQ8WUD1 216 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms