RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 OR52P1PQ8NH57 321 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 NANPQ8TBE9 248 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 RASSF5Q8WWW0 418 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 RDH5Q92781 318 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 POP5Q969H6 163 aaKnown RBP7.35□□□□□ -1.23
SDF2-204ENST00000587338 DUS3LQ96G46 650 aaKnown RBP7.35□□□□□ -1.23
SDF2-204ENST00000587338 DUX5Q96PT3 197 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 C1QTNF5Q9BXJ0 243 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 TMPRSS13Q9BYE2 586 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 SLC38A1Q9H2H9 487 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 RASSF4Q9H2L5 321 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 MAGIXQ9H6Y5 334 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 MTHFD2LQ9H903 347 aaPredicted RBP7.35□□□□□ -1.23
SDF2-204ENST00000587338 NOX3Q9HBY0 568 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 CRLF2Q9HC73 371 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 BCL2L10Q9HD36 194 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 REV1Q9UBZ9 1251 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 TMED7Q9Y3B3 224 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 CMAHPQ9Y471 501 aa7.35□□□□□ -1.23
SDF2-204ENST00000587338 ZC3H12DA2A288 527 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 PLPP2O43688 288 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 DIRAS1O95057 198 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 PRSS23O95084 383 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MPZL1O95297 269 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 CST1P01037 141 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 FPR2P25090 351 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ALDH3B1P43353 468 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 HTR3AP46098 478 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 YAP1P46937 504 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 IDH2P48735 452 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 POU3F1Q03052 451 aaPredicted RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZP4Q12836 540 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MAD2L1BPQ15013 274 aaPredicted RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 LARS2Q15031 903 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 OR7A5Q15622 319 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MAPK14Q16539 360 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 DUSP7Q16829 419 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 DCAF12L2Q5VW00 463 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 PRAMEF8Q5VWM4 474 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 PRAMEF7Q5VXH5 474 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ACSM5Q6NUN0 579 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 RBMS3Q6XE24 437 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 FRRS1Q6ZNA5 592 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 LINGO2Q7L985 606 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZDHHC21Q8IVQ6 265 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 TMEM99Q8N816 258 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 FAM169BQ8N8A8 192 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 FAM71CQ8NEG0 241 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 RNF217Q8TC41 542 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MAGEE2Q8TD90 523 aaPredicted RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 GEMIN6Q8WXD5 167 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 PMM1Q92871 262 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 YIPF5Q969M3 257 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZG16BQ96DA0 208 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 SYT3Q9BQG1 590 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 SF3B5Q9BWJ5 86 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF416Q9BWM5 594 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MRPL37Q9BZE1 423 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF350Q9GZX5 532 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 NELFAQ9H3P2 528 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF665Q9H7R5 613 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 NTN4Q9HB63 628 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ARMC1Q9NVT9 282 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 MED29Q9NX70 200 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 OSGIN1Q9UJX0 560 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF443Q9Y2A4 671 aaPredicted RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 SLC35A3Q9Y2D2 325 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF281Q9Y2X9 895 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 IFT52Q9Y366 437 aa7.34□□□□□ -1.23
SDF2-204ENST00000587338 FAM32AQ9Y421 112 aaKnown RBP7.34□□□□□ -1.23
SDF2-204ENST00000587338 ZNF503-AS2A6NEH8 195 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 DNAJC9-AS1A6NH13 148 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 SAC3D1A6NKF1 404 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 AQP7P3A6NL99 342 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 CLDN24A6NM45 220 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 J3QLI3 93 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 M0R3H8 397 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 AP3D1O14617 1153 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 ZNF208O43345 1280 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 E2F6O75461 281 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 UPK3AO75631 287 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 NCR1O76036 304 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 IFNW1P05000 195 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 DBIP07108 87 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 CBR1P16152 277 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 CD247P20963 164 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 TACR3P29371 465 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 CAPZA2P47755 286 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 POLR2HP52434 150 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 CRYBA2P53672 197 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 SH3BGRP55822 239 aaPredicted RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 TMEM33P57088 247 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 KCNJ10P78508 379 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 IL13RA1P78552 427 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 ARF1P84077 181 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 ROR2Q01974 943 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 MVKQ03426 396 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 MSMPQ1L6U9 139 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms