RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OR5J2Q8NH18 312 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 OR6S1Q8NH40 331 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 NSL1Q96IY1 281 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 MCHR1Q99705 422 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 TMPRSS13Q9BYE2 586 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 B3GAT2Q9NPZ5 323 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 G6PC2Q9NQR9 355 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 ARL8BQ9NVJ2 186 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 PCDHB10Q9UN67 800 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 GRIP1Q9Y3R0 1128 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 CORINQ9Y5Q5 1042 aa9.92□□□□□ -0.82
LIG3-207ENST00000586119 A0A0A6YYJ9 748 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 CPSF4LA6NMK7 179 aaKnown RBP9.91□□□□□ -0.82
LIG3-207ENST00000586119 C17orf100A8MU93 164 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 FXYD1O00168 92 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 PLPP2O43688 288 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 MFN2O95140 757 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 UBL3O95164 117 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 TFP02787 698 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 OPN1SWP03999 348 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 NUDT2P50583 147 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 ACTG1P63261 375 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 DUSP7Q16829 419 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 NKPD1Q17RQ9 610 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 RGS7BPQ6MZT1 257 aaPredicted RBP9.91□□□□□ -0.82
LIG3-207ENST00000586119 NANOGP8Q6NSW7 305 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 C8orf82Q6P1X6 216 aaPredicted RBP9.91□□□□□ -0.82
LIG3-207ENST00000586119 UGT2A3Q6UWM9 527 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 GPR32P1Q8NGA4 272 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 OR51F2Q8NH61 342 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 C22orf15Q8WYQ4 148 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 GCDHQ92947 438 aaPredicted RBP9.91□□□□□ -0.82
LIG3-207ENST00000586119 EPYCQ99645 322 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 TMEM38AQ9H6F2 299 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 ZNF665Q9H7R5 613 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 NANOGQ9H9S0 305 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 TMEM38BQ9NVV0 291 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 TESQ9UGI8 421 aaKnown RBP9.91□□□□□ -0.82
LIG3-207ENST00000586119 SLC7A8Q9UHI5 535 aa9.91□□□□□ -0.82
LIG3-207ENST00000586119 KPNA4O00629 521 aaPredicted RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 DHHO43323 396 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 MPZL1O95297 269 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 PNPP00491 289 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 LCKP06239 509 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 QDPRP09417 244 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 EPHA1P21709 976 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 PCMT1P22061 227 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SLC6A2P23975 617 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 COMPP49747 757 aaPredicted RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 HILS1P60008 231 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 RBBP4Q09028 425 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SELPLGQ14242 412 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 TSTQ16762 297 aaKnown RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 SPRNQ5BIV9 151 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SHQ1Q6PI26 577 aaKnown RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 C16orf89Q6UX73 402 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 PIWIL3Q7Z3Z3 882 aaKnown RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 PTOV1Q86YD1 416 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SLC30A8Q8IWU4 369 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 ICA1LQ8NDH6 482 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 OR4K5Q8NGD3 323 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 OR6T1Q8NGN1 323 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 OR6X1Q8NH79 312 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SYNPRQ8TBG9 265 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 ZNF418Q8TF45 676 aaPredicted RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 FAM216AQ8WUB2 273 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 ZNF347Q96SE7 839 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 ARHGDIGQ99819 225 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 TMEM43Q9BTV4 400 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 SPATA5L1Q9BVQ7 753 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 C1QTNF5Q9BXJ0 243 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 RNF121Q9H920 327 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
LIG3-207ENST00000586119 SELENONQ9NZV5 590 aa9.9□□□□□ -0.82
LIG3-207ENST00000586119 IGLV3-9A0A075B6K5 115 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 TRAV20A0A0B4J274 112 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 M0QX08 132 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ATP5HO75947 161 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 OR6A2O95222 327 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 OR8G3PP0DMU2 310 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZNF250P15622 560 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 MAKP20794 623 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 UCP2P55851 309 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 MTPNP58546 118 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 PSME3P61289 254 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 NCALDP61601 193 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 RPS23P62266 143 aaKnown RBP9.89□□□□□ -0.83
LIG3-207ENST00000586119 MRPS11P82912 194 aaKnown RBP9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZP4Q12836 540 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ZNF74Q16587 644 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 SPATS1Q496A3 300 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ACSM5Q6NUN0 579 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 ERICH5Q6P6B1 374 aa9.89□□□□□ -0.83
LIG3-207ENST00000586119 USP51Q70EK9 711 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms