RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 NCF1BA6NI72 391 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GJE1A6NN92 205 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NCF1CA8MVU1 366 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 H0YIV9 168 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PSMD12O00232 456 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RNF13O43567 381 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PCDH7O60245 1069 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF821O75541 412 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 POP7O75817 140 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CEACAM4O75871 244 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZFAND5O76080 213 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CD160O95971 181 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 IGF2P01344 180 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PABPC4LP0CB38 370 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ANXA8P13928 327 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CD1EP15812 388 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FUT1P19526 365 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DRD5P21918 477 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 IFNA8P32881 189 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 MAGEA12P43365 314 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NKX2-1P43699 371 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SUCLG1P53597 346 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RAB10P61026 200 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 BASP1P80723 227 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DCDP81605 110 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 XIAPP98170 497 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 REEP5Q00765 189 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OGDHQ02218 1023 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TNFRSF17Q02223 184 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZBTB17Q13105 803 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SNCBQ16143 134 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DUSP5Q16690 384 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LINC00303Q3SY05 128 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 VPS26BQ4G0F5 336 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM106AQ4KMX7 169 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SDHAF4Q5VUM1 108 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 METTL21CQ5VZV1 264 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TTC23Q5W5X9 447 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 AP1ARQ63HQ0 302 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LCN10Q6JVE6 187 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 STEAP1BQ6NZ63 245 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TIPARPQ7Z3E1 657 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINA9Q86WD7 417 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NR2C2APQ86WQ0 139 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC35F2Q8IXU6 374 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LINC00471Q8N535 108 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 BMPERQ8N8U9 685 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR9K2Q8NGE7 335 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FGFBP3Q8TAT2 258 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CNIH3Q8TBE1 160 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FNDC8Q8TC99 324 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ELMO1Q92556 727 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 L3HYPDHQ96EM0 354 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ST6GAL2Q96JF0 529 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR137Q96N19 417 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SH3GL3Q99963 347 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRC61Q9BV99 259 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RIOK2Q9BVS4 552 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C1QTNF4Q9BXJ3 329 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ACPTQ9BZG2 426 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC7A5P2Q9GIP4 190 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2B2Q9GZK3 357 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 WWTR1Q9GZV5 400 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C12orf10Q9HB07 376 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC25A19Q9HC21 320 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ANKHQ9HCJ1 492 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RRAGDQ9NQL2 400 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C8orf4Q9NR00 106 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 P2RX2Q9UBL9 471 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 IKZF3Q9UKT9 509 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 MMP24Q9Y5R2 645 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 V9GYY5 206 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LRP4O75096 1905 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RELNP78509 3460 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FLNBO75369 2602 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SCN8AQ9UQD0 1980 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 IGHV1OR21-1A0A087WYE8 117 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1W2PPI3 338 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ASPDHA6ND91 283 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CENPBD1B2RD01 187 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TCP11X1B4DZS4 312 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NPIPA2E9PIF3 369 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TP53I11O14683 189 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 BCKDKO14874 412 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 POLR1CO15160 346 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SURF4O15260 269 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP6V0E1O15342 81 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RGS16O15492 202 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR10H2O60403 315 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RAD1O60671 282 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DNAJB6O75190 326 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 KLHL2O95198 593 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GNLYP22749 145 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FEN1P39748 380 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RPL13AP40429 203 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC6A8P48029 635 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RAB38P57729 211 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 BTG1P62324 171 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RPS4XP62701 263 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PRDX1Q06830 199 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms