RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TROVE2P10155 538 aaKnown RBP eCLIP17.52■□□□□ 0.4
TOP3A-219ENST00000584887 SAGP10523 405 aaPredicted RBP17.52■□□□□ 0.4
TOP3A-219ENST00000584887 OR1E2P47887 323 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 DAP3P51398 398 aaKnown RBP17.52■□□□□ 0.4
TOP3A-219ENST00000584887 HSF2Q03933 536 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 PLP2Q04941 152 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 TBC1D28Q2M2D7 210 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 LRRC23Q53EV4 343 aaPredicted RBP17.52■□□□□ 0.4
TOP3A-219ENST00000584887 HDDC2Q7Z4H3 204 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 DPPA2Q7Z7J5 298 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 OR8J3Q8NGG0 315 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 TMEM239Q8WW34 195 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 ASB10Q8WXI3 467 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 LPAR2Q9HBW0 351 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 C20orf141Q9NUB4 165 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 RIMS3Q9UJD0 308 aa17.52■□□□□ 0.4
TOP3A-219ENST00000584887 IQCMA0A1B0GVH7 501 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 SLC22A23A1A5C7 686 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 PPIHO43447 177 aaKnown RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 TRMUO75648 421 aaKnown RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 OR5F1O95221 314 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 CLPTM1O96005 669 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 IFNA14P01570 189 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 ACADSP16219 412 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 ACHEP22303 614 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 RBM34P42696 430 aaKnown RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 KLF3P57682 345 aaPredicted RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 ERVS71-1P61550 626 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 TOP3AQ13472 1001 aaPredicted RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 PIN1Q13526 163 aaPredicted RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 LIPNQ5VXI9 398 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 ERICH5Q6P6B1 374 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 TMEM154Q6P9G4 183 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 UGT2A3Q6UWM9 527 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 MOSPD2Q8NHP6 518 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 CLDND2Q8NHS1 167 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 SNX33Q8WV41 574 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 YIPF5Q969M3 257 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 TSPAN32Q96QS1 320 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 LRMDAQ9H2I8 198 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 C1orf198Q9H425 327 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 ZNF275Q9NSD4 429 aaPredicted RBP17.51■□□□□ 0.39
TOP3A-219ENST00000584887 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 MED31Q9Y3C7 131 aa17.51■□□□□ 0.39
TOP3A-219ENST00000584887 PIP5K1CO60331 668 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 SLC2A10O95528 541 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 PTHP01270 115 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 CCNOP22674 350 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 CDAP32320 146 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 MAGEB1P43366 347 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 GLO1Q04760 184 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 KLF10Q13118 480 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 GLCCI1Q86VQ1 547 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 OR1J2Q8NGS2 313 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 SYNPRQ8TBG9 265 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 C11orf40Q8WZ69 217 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 NSMAFQ92636 917 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 TPD52L3Q96J77 140 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 KCNN2Q9H2S1 579 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 CCNB1IP1Q9NPC3 277 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 HINT3Q9NQE9 182 aaKnown RBP17.5■□□□□ 0.39
TOP3A-219ENST00000584887 TREM2Q9NZC2 230 aa17.5■□□□□ 0.39
TOP3A-219ENST00000584887 BBIP1A8MTZ0 92 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 B4DSR2 109 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 CDC14BO60729 498 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 PCMT1P22061 227 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 APLNRP35414 380 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 ARFIP2P53365 341 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 DVL1P1P54792 670 aaPredicted RBP17.49■□□□□ 0.39
TOP3A-219ENST00000584887 CD47Q08722 323 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 MAPRE2Q15555 327 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 HIST3H3Q16695 136 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 CYBRD1Q53TN4 286 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 C10orf82Q8WW14 230 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 MRPL13Q9BYD1 178 aaKnown RBP17.49■□□□□ 0.39
TOP3A-219ENST00000584887 POLR2J2Q9GZM3 115 aaKnown RBP17.49■□□□□ 0.39
TOP3A-219ENST00000584887 POLR2J3Q9H1A7 115 aaKnown RBP17.49■□□□□ 0.39
TOP3A-219ENST00000584887 FGFR1OP2Q9NVK5 253 aa17.49■□□□□ 0.39
TOP3A-219ENST00000584887 STX18Q9P2W9 335 aaKnown RBP17.49■□□□□ 0.39
TOP3A-219ENST00000584887 LOC100653049A0A140TA62 436 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 WNT9BO14905 357 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 TPD52L2O43399 206 aaKnown RBP17.48■□□□□ 0.39
TOP3A-219ENST00000584887 KRT34O76011 436 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 DRD4P21917 467 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 RAD52P43351 418 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 CCL8P80075 99 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 FMODQ06828 376 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 LAPTM4AQ15012 233 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 SGCAQ16586 387 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 COQ5Q5HYK3 327 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 PABPC1L2AQ5JQF8 200 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 ZNF519Q8TB69 540 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 C1orf159Q96HA4 380 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 ZNF583Q96ND8 569 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 ZNF416Q9BWM5 594 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 SAR1AQ9NR31 198 aa17.48■□□□□ 0.39
TOP3A-219ENST00000584887 CUBNO60494 3623 aa17.47■□□□□ 0.39
TOP3A-219ENST00000584887 C17orf100A8MU93 164 aa17.47■□□□□ 0.39
TOP3A-219ENST00000584887 FAM220BPB1ANY3 271 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms