RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SLC26A10Q8NG04 563 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR4M1Q8NGD0 313 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR51D1Q8NGF3 324 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR5L2Q8NGL0 311 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 LGALS14Q8TCE9 139 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 CCNL2Q96S94 520 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 AUNIPQ9H7T9 357 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 PAQR5Q9NXK6 330 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 TAS2R5Q9NYW4 299 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 PLEKHB1Q9UF11 243 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 C19orf25Q9UFG5 118 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 NUFIP1Q9UHK0 495 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 ZNF221Q9UK13 617 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 PEX16Q9Y5Y5 336 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 HEATR1Q9H583 2144 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 MT-ND4P03905 459 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 DBHP09172 617 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 DUSP3P51452 185 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 CCR6P51684 374 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 ZNF141Q15928 474 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 MFSD4AQ8N468 514 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR5M9Q8NGP3 310 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR10K1Q8NGX5 313 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 DHRS1Q96LJ7 313 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 MMP27Q9H306 513 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 LRFN1Q9P244 771 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 KLHL9Q9P2J3 617 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 CRNNQ9UBG3 495 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 TRIM64CA6NLI5 447 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 H3BMH7 237 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 PTP4A3O75365 173 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 SULT1C4O75897 302 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 IL7P13232 177 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 MAP3K8P41279 467 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 C17orf67Q0P5P2 114 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 LYSMD2Q8IV50 215 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR51A2Q8NGJ7 313 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR1J4Q8NGS1 313 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 OR2T4Q8NH00 348 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 SLC22A8Q8TCC7 542 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 FBLIM1Q8WUP2 373 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 KISS1RQ969F8 398 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 ZNF385AQ96PM9 386 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 ELF5Q9UKW6 265 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 IGKV3D-11A0A0A0MRZ8 115 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 FLRT2O43155 660 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 WISP2O76076 250 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 RAB3BP20337 219 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 POLR2HP52434 150 aaKnown RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 PPP5CP53041 499 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 EPHA4P54764 986 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 EFR3AQ14156 821 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 THOC7Q6I9Y2 204 aaKnown RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 GDPD3Q7L5L3 318 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TIGD4Q8IY51 512 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 ZNF283Q8N7M2 679 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 OR13C9Q8NGT0 318 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 OR5AK2Q8NH90 309 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 SPACA9Q96E40 222 aaPredicted RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 FKBP14Q9NWM8 211 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 NDUFB11Q9NX14 153 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TRAV36DV7A0A075B6V5 113 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TMEM269A0A1B0GVZ9 245 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 A8MVM7 634 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 NPIPA2E9PIF3 369 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 NPIPA3F8WFD2 350 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 RGS9O75916 674 aaPredicted RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 PNPP00491 289 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 RLN1P04808 185 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 H2BFMP0C1H6 154 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 HSD11B1P28845 292 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 GALNSP34059 522 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 SSR4P51571 173 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 SLC22A10Q63ZE4 541 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 SLITRK4Q8IW52 837 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TMEM234Q8WY98 164 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 MAFIPQ8WZ33 124 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 CMBLQ96DG6 245 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 STRADBQ9C0K7 418 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TCFL5Q9UL49 500 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 LSM2Q9Y333 95 aaKnown RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 KDM4BO94953 1096 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 SLITRK5O94991 958 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 GLI4P10075 376 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 DIO1P49895 249 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 PRPS1P60891 318 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 HSF1Q00613 529 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 TEKQ02763 1124 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 MFGE8Q08431 387 aaPredicted RBP9.23□□□□□ -0.93
RFFL-212ENST00000584655 IL10RAQ13651 578 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 TSC22D1Q15714 1073 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 ABHD17BQ5VST6 288 aa9.23□□□□□ -0.93
RFFL-212ENST00000584655 C6orf15Q6UXA7 325 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms