RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
COPS3-218ENST00000584216 A0A0B4J2E0 115 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 A0A1B0GX12 115 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 PRORSD1PA6NEY8 169 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 TRPC5OSA6NMA1 111 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 C11orf98E9PRG8 122 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 TM9SF1O15321 606 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 DHHO43323 396 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 SPRY3O43610 288 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 UBOX5O94941 541 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 IGHV1-46P01743 117 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
COPS3-218ENST00000584216 MAKP20794 623 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 ZNF84P51523 738 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 RGS8P57771 180 aaPredicted RBP11.31□□□□□ -0.6
COPS3-218ENST00000584216 HSF2Q03933 536 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 STX3Q13277 289 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 RGNQ15493 299 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 ZNF362Q5T0B9 420 aaPredicted RBP11.31□□□□□ -0.6
COPS3-218ENST00000584216 C17orf107Q6ZR85 190 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 MOGAT1Q96PD6 335 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 NPTNQ9Y639 398 aa11.31□□□□□ -0.6
COPS3-218ENST00000584216 H3BSA7 217 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 SDHDO14521 159 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 RNF13O43567 381 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 KNG1P01042 644 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 IGHG1P01857 330 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 ADH4P08319 380 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 BMP2P12643 396 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 ZNF12P17014 697 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 SLC9A3R2Q15599 337 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 OR1Q1Q15612 314 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 CEP85LQ5SZL2 805 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 LEG1Q6P5S2 330 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 WDR88Q6ZMY6 472 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 HDDC2Q7Z4H3 204 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 HIPK4Q8NE63 616 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 MAL2Q969L2 176 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 TMIGD2Q96BF3 282 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 C1orf147Q96MC9 270 aaPredicted RBP11.3□□□□□ -0.6
COPS3-218ENST00000584216 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 OR5V1Q9UGF6 321 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 INSIG2Q9Y5U4 225 aa11.3□□□□□ -0.6
COPS3-218ENST00000584216 M0QZ24 198 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 CLIC1O00299 241 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 HDAC3O15379 428 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 QDPRP09417 244 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 NUDT7P0C024 238 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 SBK2P0C263 348 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 MDKP21741 143 aaPredicted RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 CCNOP22674 350 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 EPHA3P29320 983 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 MMP15P51511 669 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 CLRN1P58418 232 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 GTDC1Q4AE62 458 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 TMEM155Q4W5P6 130 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 ESCO2Q56NI9 601 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 KLF17Q5JT82 389 aaPredicted RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 NXNQ6DKJ4 435 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 REEP3Q6NUK4 255 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 C16orf87Q6PH81 154 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 ZER1Q7Z7L7 766 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 GOLGA6L1Q8N7Z2 621 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 OR52E2Q8NGJ4 325 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 GTF3AQ92664 365 aaKnown RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 ZNF48Q96MX3 618 aaPredicted RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 ZNF607Q96SK3 696 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 MMP27Q9H306 513 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 BEX1Q9HBH7 125 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 SSU72Q9NP77 194 aaKnown RBP11.29□□□□□ -0.6
COPS3-218ENST00000584216 CCNB1IP1Q9NPC3 277 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 MMP26Q9NRE1 261 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 ARMCX1Q9P291 453 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 IL20RAQ9UHF4 553 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 ZNF281Q9Y2X9 895 aa11.29□□□□□ -0.6
COPS3-218ENST00000584216 A8MXK9 166 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 LRRN3E7EW58 273 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 TIMM23O14925 209 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 SERPINB7O75635 380 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 CRYBA1P05813 215 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 CD55P08174 381 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms