RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FAM157BP0CG42 384 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 B4GALT1P15291 398 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 SLC6A2P23975 617 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 GRPRP30550 384 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 MNAT1P51948 309 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 LCN2P80188 198 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 EGR4Q05215 589 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 CAMK2DQ13557 499 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 MAPK11Q15759 364 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 CYP51A1Q16850 503 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 HFEQ30201 348 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 RABL3Q5HYI8 236 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 C8orf82Q6P1X6 216 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-215ENST00000583328 USP51Q70EK9 711 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 NET1Q7Z628 596 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-215ENST00000583328 OR6N1Q8NGY5 312 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 SYNPRQ8TBG9 265 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 TAAR8Q969N4 342 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 TMEM19Q96HH6 336 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 LRR1Q96L50 414 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 FOXB1Q99853 325 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 GAL3ST1Q99999 423 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 ECSITQ9BQ95 431 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 ULBP2Q9BZM5 246 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 SLITRK2Q9H156 845 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 SLCO1C1Q9NYB5 712 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 NKIRAS2Q9NYR9 191 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 RPS6KB2Q9UBS0 482 aa10.47□□□□□ -0.73
TOP3A-215ENST00000583328 A0A0G2JPF8 293 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 LOC102725191A0A1B0GVB3 256 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF726A6NNF4 738 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HNRNPCL2B2RXH8 293 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HNRNPCL3B7ZW38 293 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HNRNPCL1O60812 293 aaKnown RBP10.46□□□□□ -0.73
TOP3A-215ENST00000583328 SERPINA5P05154 406 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 PATE4P0C8F1 98 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HNRNPCL4P0DMR1 293 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HLA-DOBP13765 273 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 KLF3P57682 345 aaPredicted RBP10.46□□□□□ -0.73
TOP3A-215ENST00000583328 HOXC5Q00444 222 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 CDK6Q00534 326 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 RBBP4Q09028 425 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 SCARB2Q14108 478 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ARMCX4Q5H9R4 360 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 FAM69AQ5T7M9 428 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 RNF220Q5VTB9 566 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 REEP3Q6NUK4 255 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF627Q7L945 461 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 CALHM3Q86XJ0 350 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 PTOV1Q86YD1 416 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 WDFY1Q8IWB7 410 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 C11orf65Q8NCR3 313 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 OR10A6Q8NH74 314 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 NFKBIDQ8NI38 313 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 BBS10Q8TAM1 723 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ST7LQ8TDW4 575 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 C11orf40Q8WZ69 217 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
TOP3A-215ENST00000583328 SLC38A4Q969I6 547 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 MAL2Q969L2 176 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 SLC25A28Q96A46 364 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 NSL1Q96IY1 281 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 OR51B6Q9H340 312 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 BCL2L10Q9HD36 194 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 NDE1Q9NXR1 346 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 UBAP1Q9NZ09 502 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF224Q9NZL3 707 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ZNF69Q9UC07 566 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 NUP50Q9UKX7 468 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 CACNG2Q9Y698 323 aa10.46□□□□□ -0.73
TOP3A-215ENST00000583328 ISPDA4D126 451 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 MS4A18H0YCH9 400 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 FOXH1O75593 365 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 LCKP06239 509 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 NQO1P15559 274 aaKnown RBP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF250P15622 560 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 CALB2P22676 271 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 GZMMP51124 257 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 PSME3P61289 254 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 MXRA7P84157 204 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 MOGQ16653 247 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 TSTQ16762 297 aaKnown RBP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 MS4A18Q3C1V0 323 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 RPS26P11Q5JNZ5 115 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ERICH5Q6P6B1 374 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 C5orf46Q6UWT4 87 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ZNF584Q8IVC4 421 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 SLC30A8Q8IWU4 369 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 SLC15A3Q8IY34 581 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 SYT14Q8NB59 555 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ICA1LQ8NDH6 482 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 HIPK4Q8NE63 616 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 CCL17Q92583 94 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 TAF15Q92804 592 aaKnown RBP eCLIP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 ELMOD3Q96FG2 381 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 TXNDC15Q96J42 360 aa10.45□□□□□ -0.74
TOP3A-215ENST00000583328 C1orf147Q96MC9 270 aaPredicted RBP10.45□□□□□ -0.74
TOP3A-215ENST00000583328 SAP30LQ9HAJ7 183 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms