RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 SLC25A44Q96H78 314 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-221ENST00000583080 C1orf147Q96MC9 270 aaPredicted RBP13.7□□□□□ -0.22
SREBF1-221ENST00000583080 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 BCL2L14Q9BZR8 327 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 UBAP1Q9NZ09 502 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 TANC2Q9HCD6 1990 aa13.7□□□□□ -0.22
SREBF1-221ENST00000583080 ZSCAN5BA6NJL1 495 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SPRY3O43610 288 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 OR6A2O95222 327 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 CH25HO95992 272 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 IGHV3-13P01766 116 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 QDPRP09417 244 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 DRD4P21917 467 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 GATA3P23771 443 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 FPR2P25090 351 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 ZFP36P26651 326 aaKnown RBP13.69□□□□□ -0.22
SREBF1-221ENST00000583080 MPV17P39210 176 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF81P51508 661 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SCARB2Q14108 478 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 NPTX1Q15818 432 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SLC36A2Q495M3 483 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SPRNQ5BIV9 151 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 LRIF1Q5T3J3 769 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 RANBP3LQ86VV4 465 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF101Q8IZC7 436 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 RBM15BQ8NDT2 890 aaKnown RBP13.69□□□□□ -0.22
SREBF1-221ENST00000583080 DEFB108BQ8NET1 73 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 OR1J1Q8NGS3 322 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 IPCEF1Q8WWN9 437 aaPredicted RBP13.69□□□□□ -0.22
SREBF1-221ENST00000583080 TAF15Q92804 592 aaKnown RBP eCLIP13.69□□□□□ -0.22
SREBF1-221ENST00000583080 ELMOD3Q96FG2 381 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF347Q96SE7 839 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 DCAF16Q9NXF7 216 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 SLC13A4Q9UKG4 626 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 TRIM33Q9UPN9 1127 aa13.69□□□□□ -0.22
SREBF1-221ENST00000583080 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 KPNA4O00629 521 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 RNF13O43567 381 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 CHP2O43745 196 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 UBOX5O94941 541 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 LYPD3O95274 346 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 THY1P04216 161 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 MMP7P09237 267 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 WNT5AP41221 380 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 MMP15P51511 669 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 PAGE3Q5JUK9 113 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 TREML4Q6UXN2 200 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 TSPYL5Q86VY4 417 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 ARMC8Q8IUR7 673 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 BCL6BQ8N143 479 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 MCHR1Q99705 422 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 ARHGDIGQ99819 225 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 UNKLQ9H9P5 680 aaKnown RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 MMP26Q9NRE1 261 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
SREBF1-221ENST00000583080 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 LEF1Q9UJU2 399 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 V9GYY5 206 aaPredicted RBP13.68□□□□□ -0.22
SREBF1-221ENST00000583080 TRBV5-3A0A0A0MS03 114 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 TMEM120BA0PK00 339 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 CPSF4LA6NMK7 179 aaKnown RBP13.67□□□□□ -0.22
SREBF1-221ENST00000583080 ENTPD5O75356 428 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 MT-ND5P03915 603 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 OPN1SWP03999 348 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 CCNOP22674 350 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 PRTN3P24158 256 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 PABPC1L2AQ5JQF8 200 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 KLF17Q5JT82 389 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-221ENST00000583080 FAM209AQ5JX71 171 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 WDR93Q6P2C0 686 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF613Q6PF04 617 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 RBMS3Q6XE24 437 aaKnown RBP13.67□□□□□ -0.22
SREBF1-221ENST00000583080 DOK3Q7L591 496 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 DPPA2Q7Z7J5 298 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 FUNDC1Q8IVP5 155 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 NOXO1Q8NFA2 376 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 OR1J2Q8NGS2 313 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 GEMIN6Q8WXD5 167 aaKnown RBP13.67□□□□□ -0.22
SREBF1-221ENST00000583080 MCHR2Q969V1 340 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-221ENST00000583080 TMEM38AQ9H6F2 299 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
SREBF1-221ENST00000583080 FMO6PO60774 539 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 PTHP01270 115 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 IGHG1P01857 330 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 SLC6A2P23975 617 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 APLNRP35414 380 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 CLRN1P58418 232 aa13.66□□□□□ -0.22
SREBF1-221ENST00000583080 SEC61A1P61619 476 aaKnown RBP13.66□□□□□ -0.22
SREBF1-221ENST00000583080 HSF2Q03933 536 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms