RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 LUZP2Q86TE4 346 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 C8orf59Q8N0T1 100 aaPredicted RBP7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 ARIH2OSQ8N7S6 290 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 OR5M1Q8NGP8 315 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 OR13C2Q8NGS9 318 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 OR51A7Q8NH64 312 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 OR6X1Q8NH79 312 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TFAP2CQ92754 450 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 ZNF524Q96C55 264 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 PIK3IP1Q96FE7 263 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TNFRSF13CQ96RJ3 184 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 PITX2Q99697 317 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 SLC29A1Q99808 456 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 WACQ9BTA9 647 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 ALG12Q9BV10 488 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TSSK6Q9BXA6 273 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 REG4Q9BYZ8 158 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 ANKRD60Q9BZ19 345 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TOR3AQ9H497 397 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TMEM185BQ9H7F4 350 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 SMURF2Q9HAU4 748 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 MOV10Q9HCE1 1003 aaKnown RBP7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 B3GAT2Q9NPZ5 323 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 CMC2Q9NRP2 79 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 FAM118AQ9NWS6 357 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 TAS2R5Q9NYW4 299 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 NDRG4Q9ULP0 352 aaKnown RBP7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 EMC9Q9Y3B6 208 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 GMPPBQ9Y5P6 360 aa7.72□□□□□ -1.17
PDLIM1P3-201ENST00000582370 A0A1W2PNR3 127 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MS4A18H0YCH9 400 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 BHLHE40O14503 412 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PRODHO43272 600 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 DENRO43583 198 aaKnown RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 CXCL13O43927 109 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PIP5K1CO60331 668 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 RENP00797 406 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 IGHG1P01857 330 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 IL11P20809 199 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GGT2P36268 569 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GUCA1AP43080 201 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 STARP49675 285 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SUCLG1P53597 346 aaKnown RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 NR1H2P55055 460 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 CTXN1P60606 82 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 CXCR4P61073 352 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SNRPGP62308 76 aaKnown RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SRYQ05066 204 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 LGALS3BPQ08380 585 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PPP1R8Q12972 351 aaKnown RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MED21Q13503 144 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GINS1Q14691 196 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PON3Q15166 354 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PGGHGQ32M88 737 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 NRN1LQ496H8 165 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 THEM4Q5T1C6 240 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 CREB3L2Q70SY1 520 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GALNT5Q7Z7M9 940 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GPAT4Q86UL3 456 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 JAZF1Q86VZ6 243 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 EGFL6Q8IUX8 553 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 GID4Q8IVV7 300 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 HS3ST5Q8IZT8 346 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 TMEM99Q8N816 258 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 POMGNT2Q8NAT1 580 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 OR9K2Q8NGE7 335 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 NRG4Q8WWG1 115 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 ZNF570Q96NI8 536 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 RBP7Q96R05 134 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 TRIB1Q96RU8 372 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 KLHDC3Q9BQ90 382 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 YTHDF1Q9BYJ9 559 aaKnown RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PLA2G12AQ9BZM1 189 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 PIGMQ9H3S5 423 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 RIBC2Q9H4K1 309 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 TMEM160Q9NX00 188 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 H2AFY2Q9P0M6 372 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 KLHL13Q9P2N7 655 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 CLCF1Q9UBD9 225 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 LPAR3Q9UBY5 353 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 BLOC1S6Q9UL45 172 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MOKQ9UQ07 419 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 LRRC42Q9Y546 428 aa7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MAGED1Q9Y5V3 778 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P3-201ENST00000582370 TRAV27A0A087WT01 109 aa7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 A8MXE2 369 aa7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SMAD9O15198 467 aaKnown RBP7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SS18L1O75177 396 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SLC43A1O75387 559 aa7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 MRPL33O75394 65 aaKnown RBP7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 SNAP29O95721 258 aa7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 TCEA1P23193 301 aaKnown RBP7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 POU1F1P28069 291 aa7.7□□□□□ -1.18
PDLIM1P3-201ENST00000582370 AQP2P41181 271 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms