RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 MCM3APO60318 1980 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 A0A1W2PQ72 361 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 H3BMH7 237 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PDLIM1O00151 329 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 TOR1AO14656 332 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SH2D1BO14796 132 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PSIP1O75475 530 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 ZNF189O75820 626 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 OR2J3O76001 311 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PLEKP08567 350 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 GSTT2P0CG29 244 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 GSTT2BP0CG30 244 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 TNNI1P19237 187 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 RGRP47804 291 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 UQCRFS1P47985 274 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 NUMBP49757 651 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 GDI2P50395 445 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 MFAP2P55001 183 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CDK16Q00536 496 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 BST2Q10589 180 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 NME3Q13232 169 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CASP8Q14790 479 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 USF2Q15853 346 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 SGCAQ16586 387 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 C6orf226Q5I0X4 101 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 TMEM31Q5JXX7 168 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 ACER2Q5QJU3 275 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CELF3Q5SZQ8 465 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 LGSNQ5TDP6 509 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 ZNF658Q5TYW1 1059 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 FAM219BQ5XKK7 198 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 TWF2Q6IBS0 349 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 OR52W1Q6IF63 320 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 STOX1Q6ZVD7 989 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 ASRGL1Q7L266 308 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SH2D6Q7Z4S9 175 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 DEFB128Q7Z7B8 93 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 STX12Q86Y82 276 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CEP112Q8N8E3 955 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 UBA3Q8TBC4 463 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CAPSLQ8WWF8 208 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SLC38A4Q969I6 547 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 C10orf35Q96D05 121 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SERAC1Q96JX3 654 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 RIT2Q99578 217 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 OMDQ99983 421 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SELENOSQ9BQE4 189 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 TTYH2Q9BSA4 534 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 NAT9Q9BTE0 207 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 DPH7Q9BTV6 452 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 DUSP16Q9BY84 665 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PARD6BQ9BYG5 372 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 UGT1A10Q9HAW8 530 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 CSNK1G1Q9HCP0 422 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 MRPS30Q9NP92 439 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 MRPL40Q9NQ50 206 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.32□□□□□ -1.88
NF1-220ENST00000581113 SLC39A1Q9NY26 324 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 NKIRAS1Q9NYS0 192 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 RBAKQ9NYW8 714 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 IL37Q9NZH6 218 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 ADA2Q9NZK5 511 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 ADAM22Q9P0K1 906 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 SLC17A7Q9P2U7 560 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PSMC3IPQ9P2W1 217 aaPredicted RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 LHX3Q9UBR4 397 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PHF11Q9UIL8 331 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 FLVCR2Q9UPI3 526 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 LRRC42Q9Y546 428 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 PUS1Q9Y606 427 aaKnown RBP eCLIP3.32□□□□□ -1.88
NF1-220ENST00000581113 MAD1L1Q9Y6D9 718 aa3.32□□□□□ -1.88
NF1-220ENST00000581113 LAMA2P24043 3122 aaKnown RBP3.32□□□□□ -1.88
NF1-220ENST00000581113 LCTP09848 1927 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 A0A0C4DFX4 3053 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 CDH23Q9H251 3354 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 TMEM210A6NLX4 147 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 ZNF99A8MXY4 864 aaPredicted RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 H0YL77 283 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 RAD51BO15315 384 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 CYTH3O43739 400 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 OR2F2O95006 317 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 ALOX5P09917 674 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 ZNF286BP0CG31 522 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 ATP1B2P14415 290 aaPredicted RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 KLK2P20151 261 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 MAGP20916 626 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 PSMB6P28072 239 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 GTF2E2P29084 291 aaKnown RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 CDH5P33151 784 aaPredicted RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 MAGEA5P43359 124 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 NPY2RP49146 381 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 OR2B6P58173 313 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 MLF1P58340 268 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 POLR2GP62487 172 aaKnown RBP eCLIP3.31□□□□□ -1.88
NF1-220ENST00000581113 OC90Q02509 493 aaPredicted RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 PAX5Q02548 391 aa3.31□□□□□ -1.88
NF1-220ENST00000581113 PLOD1Q02809 727 aaPredicted RBP3.31□□□□□ -1.88
NF1-220ENST00000581113 FADDQ13158 208 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms