RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF362Q5T0B9 420 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 C10orf128Q5T292 105 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 C8orf59Q8N0T1 100 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 FAM26EQ8N5C1 309 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 TCEANCQ8N8B7 351 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 C1orf162Q8NEQ5 155 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 STEAP2Q8NFT2 490 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 TMEM163Q8TC26 289 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 TFAP2CQ92754 450 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 ZNF184Q99676 751 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 NUAK2Q9H093 628 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 RERGLQ9H628 205 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 RPRD1BQ9NQG5 326 aaKnown RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 CLN6Q9NWW5 311 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 PRSS50Q9UI38 385 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 RAB26Q9ULW5 256 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 GPR52Q9Y2T5 361 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
SKA2-205ENST00000580541 CFAP46Q8IYW2 2715 aa12.6□□□□□ -0.39
SKA2-205ENST00000580541 OR6C68A6NDL8 312 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 E9PQ18 207 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 PRODHO43272 600 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 ZG16O60844 167 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 HOXC12P31275 282 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 CD79BP40259 229 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 CEACAM16Q2WEN9 425 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 FBXL19-AS1Q494R0 122 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SLC35D3Q5M8T2 416 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SLC25A30Q5SVS4 291 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SFRP5Q5T4F7 317 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 PLBD1Q6P4A8 553 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 CXXC5Q7LFL8 322 aaKnown RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 DPPA2Q7Z7J5 298 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 ZBTB46Q86UZ6 589 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 P2RY8Q86VZ1 359 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 LIX1LQ8IVB5 337 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 GID4Q8IVV7 300 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 GABRG1Q8N1C3 465 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 PROKR2Q8NFJ6 384 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 KISS1RQ969F8 398 aaPredicted RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 DDOQ99489 341 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 WACQ9BTA9 647 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 RACGAP1Q9H0H5 632 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 OR10A4Q9H209 315 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 MOV10Q9HCE1 1003 aaKnown RBP12.59□□□□□ -0.39
SKA2-205ENST00000580541 GALNT8Q9NY28 637 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 B9D1Q9UPM9 204 aa12.59□□□□□ -0.39
SKA2-205ENST00000580541 SLC22A31A6NKX4 558 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 C16orf97H3BN30 126 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 H7C1C5 153 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 PRKYO43930 277 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 TMCC2O75069 709 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 SLC2A10O95528 541 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 HLA-DQA2P01906 255 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 OR8G3PP0DMU2 310 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 PPP3CBP16298 524 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 IL32P24001 234 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 LAP3P28838 519 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 FMO3P31513 532 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 LCN6P62502 163 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 EFNB1P98172 346 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 IL5RAQ01344 420 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 TMED1Q13445 227 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 LCN1P1Q5VSP4 162 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 ZNF691Q5VV52 312 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 ZNF474Q6S9Z5 364 aaPredicted RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 OR6V1Q8N148 313 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 ITLN2Q8WWU7 325 aaPredicted RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 NSMAFQ92636 917 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 PTP4A1Q93096 173 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 NMD3Q96D46 503 aaKnown RBP12.58□□□□□ -0.4
SKA2-205ENST00000580541 IL4I1Q96RQ9 567 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 FOXB1Q99853 325 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 NMNAT2Q9BZQ4 307 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 OR51V1Q9H2C8 321 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 SEC61A2Q9H9S3 476 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
SKA2-205ENST00000580541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
SKA2-205ENST00000580541 FAM90A27PA6NNH2 459 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 ZNF823P16415 610 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 SPI1P17947 270 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 COX5AP20674 150 aa12.57□□□□□ -0.4
SKA2-205ENST00000580541 IGHV1-2P23083 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms