RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TMEM163Q8TC26 289 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 PTP4A1Q93096 173 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TMEM45BQ96B21 275 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 GMPPAQ96IJ6 420 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 TXNDC15Q96J42 360 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 Q96M85 177 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 Q96MT0 163 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TSPAN32Q96QS1 320 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 ALG12Q9BV10 488 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TP63Q9H3D4 680 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 IMPAD1Q9NX62 359 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 ERVK13-1Q9NX77 482 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 VSX1Q9NZR4 365 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 EMC3Q9P0I2 261 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 H2AFY2Q9P0M6 372 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 KLHL13Q9P2N7 655 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 RNF6Q9Y252 685 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 LRCH1Q9Y2L9 728 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TEX13CA0A0J9YWL9 993 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 SH3D21A4FU49 640 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF726A6NNF4 738 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 RIIAD1A6NNX1 92 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 XKRYO14609 159 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 AKAP8O43823 692 aaKnown RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 PRKYO43930 277 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 SLC19A2O60779 497 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 SS18L1O75177 396 aaPredicted RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 SLC2A10O95528 541 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 CRHP06850 196 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ABOP16442 354 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF3P17036 446 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ACVR2AP27037 513 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ACVR1BP36896 505 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF133P52736 654 aaPredicted RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 MLLT10P55197 1068 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 EGR3Q06889 387 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 CD47Q08722 323 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 NFATC3Q12968 1075 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 TMED1Q13445 227 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 MAD2L1BPQ15013 274 aaPredicted RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 EIF2S3LQ2VIR3 472 aaKnown RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 MESTQ5EB52 335 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 THEM4Q5T1C6 240 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 EEF1A1P5Q5VTE0 462 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 RTL6Q6ICC9 239 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF585AQ6P3V2 769 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 TCEANCQ8N8B7 351 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 SLC37A3Q8NCC5 494 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 OR52E2Q8NGJ4 325 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 OR4K13Q8NH42 304 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ABHD3Q8WU67 409 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 NMD3Q96D46 503 aaKnown RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 PLEKHA8Q96JA3 519 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZFP3Q96NJ6 502 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF385AQ96PM9 386 aaKnown RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 YTHDF1Q9BYJ9 559 aaKnown RBP7.09□□□□□ -1.27
COPS3-215ENST00000578317 NMNAT2Q9BZQ4 307 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 ZNF407Q9C0G0 2248 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 POLEQ07864 2286 aa7.09□□□□□ -1.27
COPS3-215ENST00000578317 SLC22A23A1A5C7 686 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 OR6C68A6NDL8 312 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 SNTNA6NMZ2 147 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 KDM4EB2RXH2 506 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 PRR23D1E9PI22 279 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 ARHGEF9O43307 516 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 WBP4O75554 376 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 TRMUO75648 421 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 PLGP00747 810 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 IGHG1P01857 330 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 TPOP07202 933 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 PGA4P0DJD7 388 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 PGA3P0DJD8 388 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 PRR23D2P0DMB1 279 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 NR2C1P13056 603 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 PAICSP22234 425 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 CEACAM8P31997 349 aaPredicted RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 CENPAP49450 140 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 BIDP55957 195 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 CLDN17P56750 224 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 IL5RAQ01344 420 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 RUNX1T1Q06455 604 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.09□□□□□ -1.28
COPS3-215ENST00000578317 KRR1Q13601 381 aaKnown RBP7.09□□□□□ -1.28
COPS3-215ENST00000578317 CRMP1Q14194 572 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 C6orf141Q5SZD1 244 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 C1orf185Q5T7R7 199 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 RIPPLY2Q5TAB7 128 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 NXNL2Q5VZ03 156 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 B3GNT6Q6ZMB0 384 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 SEM1Q6ZVN7 128 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 MCEMP1Q8IX19 187 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 TUSC5Q8IXB3 177 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 C20orf196Q8IYI0 205 aa7.09□□□□□ -1.28
COPS3-215ENST00000578317 TMEM123Q8N131 208 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms