RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 CYP2R1Q6VVX0 501 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 TRPM8Q7Z2W7 1104 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 TSEN54Q7Z6J9 526 aaKnown RBP10.09□□□□□ -0.79
GGA3-204ENST00000578208 DHFR2Q86XF0 187 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 SKA3Q8IX90 412 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 OR4K5Q8NGD3 323 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 NSMAFQ92636 917 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 HDAC2Q92769 488 aaKnown RBP10.09□□□□□ -0.79
GGA3-204ENST00000578208 RSRC1Q96IZ7 334 aaKnown RBP10.09□□□□□ -0.79
GGA3-204ENST00000578208 DHRS1Q96LJ7 313 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 LRGUKQ96M69 825 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 ZNF570Q96NI8 536 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 TSPAN32Q96QS1 320 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 SEPHS2Q99611 448 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 TRIM15Q9C019 465 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 C1orf198Q9H425 327 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 SEC61A2Q9H9S3 476 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 CCNB1IP1Q9NPC3 277 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 IL1RAPQ9NPH3 570 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 B3GNT2Q9NY97 397 aa10.09□□□□□ -0.79
GGA3-204ENST00000578208 IQCMA0A1B0GVH7 501 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 TRIM64A6NGJ6 449 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 TRIM64BA6NI03 449 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 UNC119BA6NIH7 251 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 B9A039 149 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 CDC42EP2O14613 210 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 OR10H3O60404 316 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 SLC2A10O95528 541 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 IGHV4-39P01824 125 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 INHBBP09529 407 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 OR4A8P0C604 315 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 NPR2P20594 1047 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 ATP6V1B2P21281 511 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 RRM2P31350 389 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 SERPINF1P36955 418 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 OMPP47874 163 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 ZNF133P52736 654 aaPredicted RBP10.08□□□□□ -0.8
GGA3-204ENST00000578208 RPS23P62266 143 aaKnown RBP10.08□□□□□ -0.8
GGA3-204ENST00000578208 ERVK-25P63136 954 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 HSF2Q03933 536 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 FMODQ06828 376 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 SNTB2Q13425 540 aaKnown RBP10.08□□□□□ -0.8
GGA3-204ENST00000578208 RAB39AQ14964 217 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 DNAL1Q4LDG9 190 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 KRT80Q6KB66 452 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 BIVMQ86UB2 503 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 MYPOPQ86VE0 399 aaPredicted RBP10.08□□□□□ -0.8
GGA3-204ENST00000578208 ARIH2OSQ8N7S6 290 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 LRRC75AQ8NAA5 344 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 ZNF519Q8TB69 540 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 CCDC124Q96CT7 223 aaKnown RBP10.08□□□□□ -0.8
GGA3-204ENST00000578208 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 SH3GL3Q99963 347 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 C1orf21Q9H246 121 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 LRMDAQ9H2I8 198 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 ZNF442Q9H7R0 627 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 CDH20Q9HBT6 801 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 NOX3Q9HBY0 568 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 DLL4Q9NR61 685 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 ZNF224Q9NZL3 707 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 FKBP7Q9Y680 259 aa10.08□□□□□ -0.8
GGA3-204ENST00000578208 A0A1W2PPL8 197 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SH3PXD2BA1X283 911 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 H7C417 338 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SMAD7O15105 426 aaKnown RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 SERPINA5P05154 406 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 ERCC1P07992 297 aaPredicted RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 PATE4P0C8F1 98 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 LIMS1P48059 325 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 RPS6KA3P51812 740 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 MRPS34P82930 218 aaKnown RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 KRR1Q13601 381 aaKnown RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 TRIM25Q14258 630 aaKnown RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 SEC23BQ15437 767 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SGCAQ16586 387 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 TBC1D28Q2M2D7 210 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 FAM98BQ52LJ0 330 aaKnown RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 GPR139Q6DWJ6 353 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 LCN8Q6JVE9 175 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SLC25A47Q6Q0C1 308 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 CLEC2AQ6UVW9 174 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 LRRC18Q8N456 261 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SLC30A7Q8NEW0 376 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 OR1J2Q8NGS2 313 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 FANK1Q8TC84 345 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 HTRA1Q92743 480 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 COX4I2Q96KJ9 171 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 MAGIXQ9H6Y5 334 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SIAEQ9HAT2 523 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SLC7A8Q9UHI5 535 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 GDF2Q9UK05 429 aaPredicted RBP10.07□□□□□ -0.8
GGA3-204ENST00000578208 SIGLEC7Q9Y286 467 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 ADAM18Q9Y3Q7 739 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 CMAHPQ9Y471 501 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 ROS1P08922 2347 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 ITPR3Q14573 2671 aa10.07□□□□□ -0.8
GGA3-204ENST00000578208 SLC22A23A1A5C7 686 aa10.06□□□□□ -0.8
GGA3-204ENST00000578208 H7C1C5 153 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms