RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 ANKS4BQ8N8V4 417 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 LRRC75AQ8NAA5 344 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 FAM156AQ8NDB6 213 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 OR4K5Q8NGD3 323 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 ACOT11Q8WXI4 607 aaPredicted RBP10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 MRPL24Q96A35 216 aaKnown RBP10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 KCNK17Q96T54 332 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 SH3GL3Q99963 347 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 VRK1Q99986 396 aaPredicted RBP10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 ANKRD19PQ9H560 264 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 SPAG4Q9NPE6 437 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 CMAHPQ9Y471 501 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 SPEF1Q9Y4P9 236 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 UGT2A1Q9Y4X1 527 aa10.73□□□□□ -0.69
CSNK1D-206ENST00000577578 FBN1P35555 2871 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 A0A087WUU8 490 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 MCIDASD6RGH6 385 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 J3KTA2 159 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 SNAP29O95721 258 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 ZNF682O95780 498 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 SERPINA1P01009 418 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 IFI30P13284 250 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 MAKP20794 623 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 GIFP27352 417 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 NR4A2P43354 598 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 YAP1P46937 504 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 PDLIM4P50479 330 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 ZNF84P51523 738 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 PSME3P61289 254 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 MRPS34P82930 218 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 RAB39AQ14964 217 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 SLC36A2Q495M3 483 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 C6orf52Q5T4I8 152 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 TMPRSS11FQ6ZWK6 438 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 CDK20Q8IZL9 346 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 SYT14Q8NB59 555 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 BCAS4Q8TDM0 211 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 NEU4Q8WWR8 484 aaPredicted RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 HDAC2Q92769 488 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 HSH2DQ96JZ2 352 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 KCTD14Q9BQ13 255 aaPredicted RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 FNDC11Q9BVV2 318 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 MRPL37Q9BZE1 423 aaKnown RBP10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 RAB1BQ9H0U4 201 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 C1orf198Q9H425 327 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 SLC7A8Q9UHI5 535 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 ENPP4Q9Y6X5 453 aa10.72□□□□□ -0.69
CSNK1D-206ENST00000577578 GSTA4O15217 222 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SYNGR3O43761 229 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SAGP10523 405 aaPredicted RBP10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 NR2C1P13056 603 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SLC9A3P48764 834 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 RPL27P61353 136 aaKnown RBP10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 RPS23P62266 143 aaKnown RBP10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 FAM205BPQ63HN1 556 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 MBOAT2Q6ZWT7 520 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 FKBP9P1Q75LS8 142 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SLC16A14Q7RTX9 510 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 PIGWQ7Z7B1 504 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 HIPK1Q86Z02 1210 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 CCDC197Q8NCU1 140 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SLC30A7Q8NEW0 376 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 ZNF519Q8TB69 540 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 FNDC8Q8TC99 324 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 FOXN4Q96NZ1 517 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 NMNAT1Q9HAN9 279 aaPredicted RBP10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 SIAEQ9HAT2 523 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 RHCGQ9UBD6 479 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 ARL2BPQ9Y2Y0 163 aa10.71□□□□□ -0.69
CSNK1D-206ENST00000577578 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 IGKV1D-43A0A0B4J1Z2 117 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 A0A1W2PRQ8 180 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 A8MV72 311 aaPredicted RBP10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 EFCAB9A8MZ26 197 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 M0R233 179 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 SLC2A10O95528 541 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 PTHP01270 115 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 ERCC1P07992 297 aaPredicted RBP10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 NCK1P16333 377 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 GALK2Q01415 458 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 FMODQ06828 376 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 DGCR6Q14129 220 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 THEM4Q5T1C6 240 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 FAM27BQ5VT28 67 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 TMEM53Q6P2H8 277 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 SLC25A47Q6Q0C1 308 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 FOXL2NBQ6ZUU3 175 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 OAFQ86UD1 273 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 ZNF786Q8N393 782 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 PAQR4Q8N4S7 273 aaPredicted RBP10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 ZNF540Q8NDQ6 660 aa10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 RBM15BQ8NDT2 890 aaKnown RBP10.7□□□□□ -0.7
CSNK1D-206ENST00000577578 OR13C2Q8NGS9 318 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms