RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SNRPNP63162 240 aaKnown RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 HHEXQ03014 270 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 RUNX3Q13761 415 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 NHLRC1Q6VVB1 395 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC22A24Q8N4F4 322 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF561Q8N587 486 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 LMX1AQ8TE12 382 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 STACQ99469 402 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 TGIF2Q9GZN2 237 aa12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 PARP12Q9H0J9 701 aaKnown RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 C19orf53Q9UNZ5 99 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB3-201ENST00000576222 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM127O75204 238 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 CCNOP22674 350 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR2B8PP59922 312 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPR85P60893 370 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPM6BQ13491 265 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 HIST2H3PS2Q5TEC6 136 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 ADAMTSL4Q6UY14 1074 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 FBXW12Q6X9E4 464 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 PLPP6Q8IY26 295 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 BVESQ8NE79 360 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 KCNG3Q8TAE7 436 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 KLHDC7BQ96G42 594 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 TGM7Q96PF1 710 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 FAM86C1Q9NVL1 165 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 KCNE3Q9Y6H6 103 aa12.02□□□□□ -0.48
PCDHGB3-201ENST00000576222 H3BML4 177 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 PLA1AQ53H76 456 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF687Q8N1G0 1237 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ELF4Q99607 663 aaPredicted RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ABCA3Q99758 1704 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 HMSDA8MTL9 139 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 F5H5K5 113 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 SIGLEC6O43699 453 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 SERPINA2P20848 420 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 P2RY2P41231 377 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 MECP2P51608 486 aaKnown RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 EPHA4P54764 986 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 GALNT16Q8N428 558 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 DIO2Q92813 273 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 MALSU1Q96EH3 234 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC25A31Q9H0C2 315 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 PTPRFP10586 1907 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 KLF8O95600 359 aaPredicted RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 FOSL1P15407 271 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF43P17038 809 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 RAB13P51153 203 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 SNU13P55769 128 aaKnown RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 DOC2BQ14184 412 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 TUSC1Q2TAM9 212 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 LILRB2Q8N423 598 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 C17orf47Q8NEP4 570 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 DDIT4LQ96D03 193 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 RRNAD1Q96FB5 475 aaKnown RBP12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ARHGDIGQ99819 225 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 NMNAT2Q9BZQ4 307 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR11A1Q9GZK7 315 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
PCDHGB3-201ENST00000576222 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 P2RY10O00398 339 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CDK2AP1O14519 115 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 SUSD5O60279 629 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 C1QCP02747 245 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CSF2RBP32927 897 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 ERV3-1Q14264 604 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 SGCBQ16585 318 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 FAM160A2Q8N612 972 aaPredicted RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR1J2Q8NGS2 313 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 FGGYQ96C11 551 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CAPNS2Q96L46 248 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 SPACA1Q9HBV2 294 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 RNF186Q9NXI6 227 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 MRPS28Q9Y2Q9 187 aaKnown RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 LANCL1O43813 399 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR13C7P0DN81 318 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 GABRA1P14867 456 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CTRB1P17538 263 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF626Q68DY1 528 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 RTL6Q6ICC9 239 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 TRILQ7L0X0 811 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR2W3Q7Z3T1 314 aa12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 DND1Q8IYX4 353 aaKnown RBP12.01□□□□□ -0.49
PCDHGB3-201ENST00000576222 NELFAQ9H3P2 528 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms