RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ZNF813Q6ZN06 617 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 SSX8Q7RTT4 187 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 HSD17B8Q92506 261 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 MUCL1Q96DR8 90 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 BOD1Q96IK1 185 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 SLC25A19Q9HC21 320 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 CRIM1Q9NZV1 1036 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.45
RPAIN-217ENST00000575711 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 A0A096LPE4 126 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 IGKV1D-43A0A0B4J1Z2 117 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 RIIAD1A6NNX1 92 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 CASKO14936 926 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 SLC16A7O60669 478 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 SEC14L2O76054 403 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 B4GALT1P15291 398 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 ZNF3P17036 446 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 COL8A1P27658 744 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 CRABP1P29762 137 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-217ENST00000575711 PTGES3Q15185 160 aaKnown RBP12.26□□□□□ -0.45
RPAIN-217ENST00000575711 TAB1Q15750 504 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 TBRG1Q3YBR2 411 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 HIKESHIQ53FT3 197 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 ACSM5Q6NUN0 579 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 ZNF627Q7L945 461 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 NPEPL1Q8NDH3 523 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 OR52N5Q8NH56 324 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 FAM222BQ8WU58 562 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 BCL2L2Q92843 193 aaPredicted RBP12.26□□□□□ -0.45
RPAIN-217ENST00000575711 ZC3HAV1LQ96H79 300 aaKnown RBP12.26□□□□□ -0.45
RPAIN-217ENST00000575711 SLC38A2Q96QD8 506 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 GABARAPL3Q9BY60 117 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 PRRG3Q9BZD7 231 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 NUAK2Q9H093 628 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 RERGLQ9H628 205 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 SLC17A5Q9NRA2 495 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 CMC2Q9NRP2 79 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 TMEM38BQ9NVV0 291 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 AMDHD2Q9Y303 409 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 HCFC1P51610 2035 aa12.26□□□□□ -0.45
RPAIN-217ENST00000575711 FREM1Q5H8C1 2179 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 A0A1W2PPL8 197 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 KHDRBS3O75525 346 aaKnown RBP12.25□□□□□ -0.45
RPAIN-217ENST00000575711 FARS2O95363 451 aaKnown RBP12.25□□□□□ -0.45
RPAIN-217ENST00000575711 EPXP11678 715 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-217ENST00000575711 CTLA4P16410 223 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 NPR2P20594 1047 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 NPRL3Q12980 569 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 PPA1Q15181 289 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 LRRC36Q1X8D7 754 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 C1QTNF12Q5T7M4 302 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 TMEM236Q5W0B7 351 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 ALKBH2Q6NS38 261 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 WFDC8Q8IUA0 241 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 CCDC36Q8IYA8 594 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 SLC37A3Q8NCC5 494 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 NANOS1Q8WY41 292 aaKnown RBP12.25□□□□□ -0.45
RPAIN-217ENST00000575711 PLEKHA8Q96JA3 519 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 SLC29A1Q99808 456 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 NELFAQ9H3P2 528 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 SEC61A2Q9H9S3 476 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 RNPEPL1Q9HAU8 725 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 OBP2BQ9NPH6 170 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 RPRD1BQ9NQG5 326 aaKnown RBP12.25□□□□□ -0.45
RPAIN-217ENST00000575711 C8orf4Q9NR00 106 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 KCNN3Q9UGI6 736 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 UGT2A1Q9Y4X1 527 aa12.25□□□□□ -0.45
RPAIN-217ENST00000575711 ARPC4-TTLL3A0A0A6YYG9 625 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 A0A1W2PR80 420 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 OR6C68A6NDL8 312 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 ZAR1LA6NP61 321 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SURF4O15260 269 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 MGRN1O60291 552 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 WNT11O96014 354 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 THBDP07204 575 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 OR8G3PP0DMU2 310 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 PAICSP22234 425 aaKnown RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 PAX7P23759 505 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 PEX2P28328 305 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 CDAP32320 146 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 CAPZA2P47755 286 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 MRPS34P82930 218 aaKnown RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SPTBN1Q01082 2364 aaKnown RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SLC34A1Q06495 639 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 CRMP1Q14194 572 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 ETFDHQ16134 617 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SNAPC1Q16533 368 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 LRRK2Q5S007 2527 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 ZNF362Q5T0B9 420 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 OR6V1Q8N148 313 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms