RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HMGA2P52926 109 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 C1QTNF12Q5T7M4 302 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 OGFRL1Q5TC84 451 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 PODNL1Q6PEZ8 512 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF813Q6ZN06 617 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 OAFQ86UD1 273 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 IGFN1Q86VF2 1251 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 RNF113BQ8IZP6 322 aaKnown RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 DEPDC4Q8N2C3 294 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 GALNT4Q8N4A0 578 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 CBR4Q8N4T8 237 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 NOXO1Q8NFA2 376 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 OR10G2Q8NGC3 310 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 OR51A7Q8NH64 312 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 SLC7A13Q8TCU3 470 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 MAGEE2Q8TD90 523 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 SMAP2Q8WU79 429 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 ASB10Q8WXI3 467 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 TMEM54Q969K7 222 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 FAM46AQ96IP4 442 aaKnown RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 DHRS1Q96LJ7 313 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 SLC38A2Q96QD8 506 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 FOXB1Q99853 325 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 RBM4BQ9BQ04 359 aaKnown RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 RBM4Q9BWF3 364 aaKnown RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 OSBPL10Q9BXB5 764 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 HIF3AQ9Y2N7 669 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 ALPK2Q86TB3 2170 aa11.56□□□□□ -0.56
RPAIN-216ENST00000575599 PRRC2AP48634 2157 aaKnown RBP11.56□□□□□ -0.56
RPAIN-216ENST00000575599 IGHV1-18A0A0C4DH31 117 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 ATP6V1G2-DDX39BF2Z307 99 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 SOD3P08294 240 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 ANXA8P13928 327 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 PRKACGP22612 351 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
RPAIN-216ENST00000575599 MYBPC1Q00872 1141 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 RUNX1T1Q06455 604 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 NPRL3Q12980 569 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 B3GLCTQ6Y288 498 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 HDDC2Q7Z4H3 204 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 PACRGLQ8N7B6 248 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 SYT14Q8NB59 555 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 OR4C15Q8NGM1 316 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 KCNS3Q9BQ31 491 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 MOKQ9UQ07 419 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 ATP23Q9Y6H3 246 aa11.55□□□□□ -0.56
RPAIN-216ENST00000575599 SH3PXD2BA1X283 911 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 E7EQL1 145 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CDC42EP2O14613 210 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 EI24O14681 340 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TRMUO75648 421 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 HLA-HP01893 362 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CELA3BP08861 270 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 QDPRP09417 244 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TSPAN19P0C672 248 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CECR9P0C854 216 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CD79AP11912 226 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ACADSP16219 412 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 SLC9A3P48764 834 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 IDH3GP51553 393 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CTXN1P60606 82 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 NKX6-1P78426 367 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 DAG1Q14118 895 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 PGGHGQ32M88 737 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 Q5PR19 223 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 MDP1Q86V88 176 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 HS3ST5Q8IZT8 346 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 AQP11Q8NBQ7 271 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 WFDC11Q8NEX6 87 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 OR4K5Q8NGD3 323 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 NRG4Q8WWG1 115 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TNFRSF13CQ96RJ3 184 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 SEC61A2Q9H9S3 476 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 FAIMQ9NVQ4 179 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TMEM5Q9Y2B1 443 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ARRDC5A6NEK1 342 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 SOCS2O14508 198 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 DHHO43323 396 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 DANCRP0C864 163 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 PAX7P23759 505 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 RPL4P36578 427 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CDKN1AP38936 164 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 LIMS1P48059 325 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 PTH2RP49190 550 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ALDH3A2P51648 485 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 RAD23AP54725 363 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ADAM8P78325 824 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 PIGFQ07326 219 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CD47Q08722 323 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 SEC23BQ15437 767 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ARMC4Q5T2S8 1044 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 LRFN4Q6PJG9 635 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 TMPRSS11FQ6ZWK6 438 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 MYPOPQ86VE0 399 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms