RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PDZD9Q8IXQ8 264 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 PM20D2Q8IYS1 436 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 C19orf47Q8N9M1 422 aaKnown RBP14.16□□□□□ -0.14
NUP88-207ENST00000573584 OR13H1Q8NG92 308 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 ZNF563Q8TA94 476 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 ZNF578Q96N58 590 aaPredicted RBP14.16□□□□□ -0.14
NUP88-207ENST00000573584 MFFQ9GZY8 342 aa14.16□□□□□ -0.14
NUP88-207ENST00000573584 TCRBV16S1A1N1A0A5B0 115 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 SLC22A23A1A5C7 686 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 SCDO00767 359 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 CDC40O60508 579 aaKnown RBP eCLIP14.15□□□□□ -0.14
NUP88-207ENST00000573584 RAD1O60671 282 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 SKP1P63208 163 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 SORDQ00796 357 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 MELKQ14680 651 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 RAB11BQ15907 218 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 FNDC7Q5VTL7 733 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 ZNF660Q6AZW8 331 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 FAM109BQ6ICB4 259 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 STEAP1BQ6NZ63 245 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 ALPK2Q86TB3 2170 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 TAAR8Q969N4 342 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 DNAJA3Q96EY1 480 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 DMRTA2Q96SC8 542 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 MS4A7Q9GZW8 240 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 ELOVL3Q9HB03 270 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 MPDZO75970 2070 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 CACNA1CQ13936 2221 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 ZNF264O43296 627 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 SRPX2O60687 465 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 HLA-DQA2P01906 255 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 FGF2P09038 288 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 TACR3P29371 465 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 HHEXQ03014 270 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 MPPED2Q15777 294 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 ARHGAP40Q5TG30 622 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 TMEM184AQ6ZMB5 413 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 METTL27Q8N6F8 245 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 CLEC1AQ8NC01 280 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 BVESQ8NE79 360 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 DUSP19Q8WTR2 217 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 ATOH1Q92858 354 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 NKX3-1Q99801 234 aaPredicted RBP14.15□□□□□ -0.14
NUP88-207ENST00000573584 ATG5Q9H1Y0 275 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 PRODH2Q9UF12 536 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 GTF2A1LQ9UNN4 478 aa14.15□□□□□ -0.14
NUP88-207ENST00000573584 LOC100289279A0A1B0GTE1 492 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 OR5K4A6NMS3 321 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 GMFGO60234 142 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 SPDEFO95238 335 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 CTRB1P17538 263 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 TPMTP51580 245 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 CTRB2Q6GPI1 263 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 SLC35D2Q76EJ3 337 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.14□□□□□ -0.15
NUP88-207ENST00000573584 CDH26Q8IXH8 852 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 SLC22A18ASQ8N1D0 253 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 OTOSQ8NHW6 89 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 KLHDC3Q9BQ90 382 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 DZANK1Q9NVP4 752 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 COL4A2P08572 1712 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 PHYHO14832 338 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 CENPAP49450 140 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 MEP1BQ16820 701 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 STPG2Q8N412 459 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 ZNF454Q8N9F8 522 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 ZSCAN1Q8NBB4 408 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 OR5M9Q8NGP3 310 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 OR1S1Q8NH92 325 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 FOXN4Q96NZ1 517 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 GAS2L1Q99501 681 aaPredicted RBP14.14□□□□□ -0.15
NUP88-207ENST00000573584 POFUT1Q9H488 388 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 EXOSC3Q9NQT5 275 aaKnown RBP14.14□□□□□ -0.15
NUP88-207ENST00000573584 SLC17A2O00624 439 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 WNT11O96014 354 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 CFPP27918 469 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 C1orf61Q13536 156 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 UBXN2BQ14CS0 331 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 PLPP7Q8NBV4 271 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 MMABQ96EY8 250 aaPredicted RBP14.14□□□□□ -0.15
NUP88-207ENST00000573584 ZC4H2Q9NQZ6 224 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 SLC22A13Q9Y226 551 aa14.14□□□□□ -0.15
NUP88-207ENST00000573584 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
NUP88-207ENST00000573584 BLACEA4D250 179 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 SDC3O75056 442 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 AQP8O94778 261 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 CLPSP04118 112 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 NAGAP17050 411 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 EIF2B5Q13144 721 aaKnown RBP14.13□□□□□ -0.15
NUP88-207ENST00000573584 POMZP3Q6PJE2 187 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 GABRG1Q8N1C3 465 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 OR6K3Q8NGY3 331 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 THRSPQ92748 146 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 PPP1R14AQ96A00 147 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 ALX4Q9H161 411 aaPredicted RBP14.13□□□□□ -0.15
NUP88-207ENST00000573584 GLS2Q9UI32 602 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 FBXL2Q9UKC9 423 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 KNL1Q8NG31 2342 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 HSPB2A8KAH6 182 aa14.13□□□□□ -0.15
NUP88-207ENST00000573584 C11orf98E9PRG8 122 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms