RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 REG4Q9BYZ8 158 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 POLR2J2Q9GZM3 115 aaKnown RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 POLR2J3Q9H1A7 115 aaKnown RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 EFCAB1Q9HAE3 211 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 MEPEQ9NQ76 525 aaPredicted RBP6.46□□□□□ -1.38
NUP88-205ENST00000572809 RIMS3Q9UJD0 308 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 ZNF229Q9UJW7 825 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 POFUT2Q9Y2G5 429 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 AP3M1Q9Y2T2 418 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 C2CD3Q4AC94 2353 aa6.46□□□□□ -1.38
NUP88-205ENST00000572809 VPS13CQ709C8 3753 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 SEC14L2O76054 403 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 OR5F1O95221 314 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 BCL10O95999 233 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 IGKV3-15P01624 115 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 IGLV1-44P01699 117 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 MT-ND1P03886 318 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 ASAH2BP0C7U1 165 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 CECR9P0C854 216 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 THRBP10828 461 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 IFNA8P32881 189 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 SERPINF1P36955 418 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 RBM34P42696 430 aaKnown RBP6.45□□□□□ -1.38
NUP88-205ENST00000572809 CAPZA2P47755 286 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 CSNK1A1P48729 337 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 NUDT6P53370 316 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 BIDP55957 195 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 LIPEQ05469 1076 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 ST3GAL3Q11203 375 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 MST1LQ2TV78 715 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 LRRC23Q53EV4 343 aaPredicted RBP6.45□□□□□ -1.38
NUP88-205ENST00000572809 DEF8Q6ZN54 512 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 DNM1P46Q6ZS02 220 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 LHFPL2Q6ZUX7 228 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 ZNF627Q7L945 461 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 PIWIL3Q7Z3Z3 882 aaKnown RBP6.45□□□□□ -1.38
NUP88-205ENST00000572809 ARPINQ7Z6K5 226 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 NKAIN4Q8IVV8 208 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 WDFY1Q8IWB7 410 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 MICU2Q8IYU8 434 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 IL17RDQ8NFM7 739 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 OR4F15Q8NGB8 312 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 OR6X1Q8NH79 312 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 TMEM255BQ8WV15 326 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 TMEM239Q8WW34 195 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 LZICQ8WZA0 190 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 TMEM54Q969K7 222 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 FBXO17Q96EF6 278 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 ULBP2Q9BZM5 246 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 CA10Q9NS85 328 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 CMTM6Q9NX76 183 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 B3GNT2Q9NY97 397 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 FBXL7Q9UJT9 491 aa6.45□□□□□ -1.38
NUP88-205ENST00000572809 ZNF503-AS2A6NEH8 195 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 B9A039 149 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 H7C417 338 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 CXCR6O00574 342 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 NDUFAB1O14561 156 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 OR7A10O76100 309 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 IGF2P01344 180 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 HLA-HP01893 362 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
NUP88-205ENST00000572809 CELA3BP08861 270 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 OR4A8P0C604 315 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 CD79AP11912 226 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 CALCRP30988 508 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 IDH3GP51553 393 aaPredicted RBP6.44□□□□□ -1.38
NUP88-205ENST00000572809 EFNA4P52798 201 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 SEC24CP53992 1094 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 UGT2B15P54855 530 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 DSCR9P59020 149 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 RAB1AP62820 205 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 HGFACQ04756 655 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 PIGFQ07326 219 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 NPRL3Q12980 569 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 GSG1Q2KHT4 349 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 ZNF813Q6ZN06 617 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 SLC46A3Q7Z3Q1 461 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 SPATA21Q7Z572 469 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 NANOGNBQ7Z5D8 188 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 CPLX4Q7Z7G2 160 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 MDP1Q86V88 176 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 Q8N1Y9 231 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 MAPK1IP1LQ8NDC0 245 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 OR10H5Q8NGA6 315 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 PFN4Q8NHR9 129 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 LIPHQ8WWY8 451 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 HTRA1Q92743 480 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 ZNF566Q969W8 418 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 CMTM5Q96DZ9 223 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 SGTBQ96EQ0 304 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 SLC25A44Q96H78 314 aaPredicted RBP6.44□□□□□ -1.38
NUP88-205ENST00000572809 FOXB1Q99853 325 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 DENND2DQ9H6A0 471 aaPredicted RBP6.44□□□□□ -1.38
NUP88-205ENST00000572809 SEC61A2Q9H9S3 476 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 GLTPQ9NZD2 209 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 MED31Q9Y3C7 131 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 NF1P21359 2839 aa6.44□□□□□ -1.38
NUP88-205ENST00000572809 ALPK2Q86TB3 2170 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms