RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 SLC18A1P54219 525 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 STX1BP61266 288 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 UBA52P62987 128 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 PLP2Q04941 152 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF74Q16587 644 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 HIST3H3Q16695 136 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 TSTQ16762 297 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 FAM209AQ5JX71 171 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 FUNDC1Q8IVP5 155 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 HIPK4Q8NE63 616 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 GTF3AQ92664 365 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 TRIM44Q96DX7 344 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 ELMOD3Q96FG2 381 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 ARHGDIGQ99819 225 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 IKZF5Q9H5V7 419 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF696Q9H7X3 374 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 SAP30LQ9HAJ7 183 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 SLCO1B3Q9NPD5 702 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 NANSQ9NR45 359 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 DDX28Q9NUL7 540 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 VAPAQ9P0L0 249 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 OPN4Q9UHM6 478 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 CORO2BQ9UQ03 480 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 PCDHGB1Q9Y5G3 927 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 CACNG2Q9Y698 323 aa8.39□□□□□ -1.07
TRAPPC1-205ENST00000572656 TRBV5-3A0A0A0MS03 114 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 EVPLLA8MZ36 301 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 M0R3H8 397 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 TMPRSS2O15393 492 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 MGRN1O60291 552 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 IGHG1P01857 330 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 HIST1H2ABP04908 130 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 MMP7P09237 267 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 HKR1P10072 659 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 APLNRP35414 380 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF81P51508 661 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF84P51523 738 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 CLRN1P58418 232 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 GLO1Q04760 184 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 FOXL1Q12952 345 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 MELKQ14680 651 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 NPTX1Q15818 432 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 PAGE3Q5JUK9 113 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 TTC33Q6PID6 262 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 EPGNQ6UW88 154 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 SHISA2Q6UWI4 295 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 HIST3H2AQ7L7L0 130 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 LRRC17Q8N6Y2 441 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 SMYD1Q8NB12 490 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 ICA1LQ8NDH6 482 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 RBM15BQ8NDT2 890 aaKnown RBP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 OR1J1Q8NGS3 322 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 CCL17Q92583 94 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 DVL3Q92997 716 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 HIST1H2ACQ93077 130 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 MCHR2Q969V1 340 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 SPDL1Q96EA4 605 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 GAL3ST1Q99999 423 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF229Q9UJW7 825 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 TRIM33Q9UPN9 1127 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 ANGPT4Q9Y264 503 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 USH1CQ9Y6N9 552 aa8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 V9GYY5 206 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-205ENST00000572656 PPIAL4EA0A075B759 164 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 CPSF4LA6NMK7 179 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 CENPBD1B2RD01 187 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 PPIAL4DF5H284 164 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 SPRY3O43610 288 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 LYPD3O95274 346 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 TGDSO95455 350 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 IGHV1-46P01743 117 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 THY1P04216 161 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 ASAH2BP0C7U1 165 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 PPIAL4FP0DN26 164 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 MAKP20794 623 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 GCH1P30793 250 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 MMP15P51511 669 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 PCBP3P57721 371 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 LCN2P80188 198 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 HSF2Q03933 536 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 SLC3A1Q07837 685 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 DUSP7Q16829 419 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF718Q3SXZ3 478 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 ENTPD8Q5MY95 495 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 RBMS3Q6XE24 437 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 LRRC18Q8N456 261 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 CPEB3Q8NE35 698 aaKnown RBP8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 OR6T1Q8NGN1 323 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 ADAMTS16Q8TE57 1224 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 C22orf15Q8WYQ4 148 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 MPP4Q96JB8 637 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 ZNF347Q96SE7 839 aa8.37□□□□□ -1.07
TRAPPC1-205ENST00000572656 SEPHS2Q99611 448 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms