RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TOMM20Q15388 145 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 C2orf68Q2NKX9 166 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 C2orf76Q3KRA6 126 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CT45A2Q5DJT8 189 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 PATE1Q8WXA2 126 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 EDAQ92838 391 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 DVL3Q92997 716 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 BMFQ96LC9 184 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 LPAR4Q99677 370 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 SCPEP1Q9HB40 452 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 KIR2DS5A0A0G2JLQ3 304 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 A0A0G2JNG1 304 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 H0YC42 278 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KIR2DS3K7RE56 304 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 WNT11O96014 354 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 CYB5AP00167 134 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 AMY2AP04746 511 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 VEGFBP49765 207 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 PLA2G7Q13093 441 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KIR2DS5Q14953 304 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM240Q5SV17 173 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 NKAIN2Q5VXU1 208 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SLC18B1Q6NT16 456 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 LPCAT3Q6P1A2 487 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 LRRC75AQ8NAA5 344 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 STEAP2Q8NFT2 490 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 OR1S1Q8NH92 325 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 BADQ92934 168 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SYT4Q9H2B2 425 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SLCO5A1Q9H2Y9 848 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 GPN3Q9UHW5 284 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 PLCL2Q9UPR0 1127 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 YBX2Q9Y2T7 364 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TCRBV16S1A1N1A0A5B0 115 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 C4orf47A7E2U8 309 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 H3BUI4 141 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 NUPL2O15504 423 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KLF8O95600 359 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 OR4E1P0C645 316 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 EFNB2P52799 333 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 YPEL5P62699 121 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 EEF1A1P5Q5VTE0 462 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM229BQ8NBD8 167 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MCHR2Q969V1 340 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 LMF1Q96S06 567 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MS4A7Q9GZW8 240 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MTIF3Q9H2K0 278 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SEMA6CQ9H3T2 930 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TAS2R3Q9NYW6 316 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MRTO4Q9UKD2 239 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 K7EQS6 105 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF264O43296 627 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SPTBP11277 2137 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KLHL26Q53HC5 615 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 MESTQ5EB52 335 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 WDR38Q5JTN6 314 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 KCTD18Q6PI47 426 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 OR10K1Q8NGX5 313 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 METTL21AQ8WXB1 218 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 ST8SIA2Q92186 375 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TOE1Q96GM8 510 aaKnown RBP9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TSPAN32Q96QS1 320 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SLC38A3Q99624 504 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 GABRG3Q99928 467 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 TWSG1Q9GZX9 223 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 CACNA1CQ13936 2221 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 SDK1Q7Z5N4 2213 aa9.75□□□□□ -0.85
CCDC40-207ENST00000572253 DCTN6O00399 190 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 ASAH2BP0C7U1 165 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 NAT1P18440 290 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 CD34P28906 385 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 GPR3P46089 330 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 DEFA5Q01523 94 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 CLEC1AQ8NC01 280 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 OR51A4Q8NGJ6 313 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 OTOSQ8NHW6 89 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 GPX8Q8TED1 209 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 OIT3Q8WWZ8 545 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 OR8B4Q96RC9 309 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF587Q96SQ5 575 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-207ENST00000572253 DNTTIP1Q9H147 329 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM185BQ9H7F4 350 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 NOP16Q9Y3C1 178 aaKnown RBP9.74□□□□□ -0.85
CCDC40-207ENST00000572253 MEGF11A6BM72 1044 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 DISC1C4P0D8 188 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 CXCR1P25024 350 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 PBX2P40425 430 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 RPS27P42677 84 aaKnown RBP9.74□□□□□ -0.85
CCDC40-207ENST00000572253 KIR3DL2P43630 455 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 SLC17A1Q14916 467 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 CSRP2Q16527 193 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 MEP1BQ16820 701 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 CCDC157Q569K6 752 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 MED25Q71SY5 747 aa9.74□□□□□ -0.85
CCDC40-207ENST00000572253 PARGQ86W56 976 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms