RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	CDC42	P60953	191 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ARF1	P84077	181 aa	Known RBP	13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NRN1L	Q496H8	165 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TIMM23B	Q5SRD1	257 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PHYHD1	Q5SRE7	291 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ACSM5	Q6NUN0	579 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF813	Q6ZN06	617 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR1K1	Q8NGR3	316 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR2T4	Q8NH00	348 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NANOS1	Q8WY41	292 aa	Known RBP	13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OTULIN	Q96BN8	352 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MUS81	Q96NY9	551 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	FOXB1	Q99853	325 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MED18	Q9BUE0	208 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MOV10	Q9HCE1	1003 aa	Known RBP	13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NGB	Q9NPG2	151 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OBP2B	Q9NPH6	170 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	FLNC	Q14315	2725 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499		A1L4Q6	167 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PRR23D1	E9PI22	279 aa	Predicted RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SURF4	O15260	269 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC2A10	O95528	541 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	WNT11	O96014	354 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR8G3P	P0DMU2	310 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KIR2DL3	P43628	341 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GABRA6	Q16445	453 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZIK1	Q3SY52	487 aa	Predicted RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLX4IP	Q5VYV7	408 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TMEM236	Q5W0B7	351 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC25A47	Q6Q0C1	308 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PTCHD4	Q6ZW05	846 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LINGO2	Q7L985	606 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	DPPA2	Q7Z7J5	298 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	WDFY1	Q8IWB7	410 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC37A3	Q8NCC5	494 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NPEPL1	Q8NDH3	523 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	S100PBP	Q96BU1	408 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HELZ2	Q9BYK8	2649 aa	Known RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NUAK2	Q9H093	628 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TOR3A	Q9H497	397 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SEC61A2	Q9H9S3	476 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SRA1	Q9HD15	236 aa	Known RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RPRD1B	Q9NQG5	326 aa	Known RBP	13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	IMPAD1	Q9NX62	359 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF226	Q9NYT6	803 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	AMDHD2	Q9Y303	409 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	FKBP7	Q9Y680	259 aa		13.09	□□□□□ -0.31
KLHDC4-223	ENST00000568499	DOPEY1	Q5JWR5	2465 aa		13.08	□□□□□ -0.31
KLHDC4-223	ENST00000568499		A0A1W2PPL8	197 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	OR5H1	A6NKK0	313 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SNAP29	O95721	258 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	CAPZA2	P47755	286 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	BLVRA	P53004	296 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SLC25A1	P53007	311 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	GLO1	Q04760	184 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	FMOD	Q06828	376 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	CRMP1	Q14194	572 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	TSC22D1	Q15714	1073 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	MEX3B	Q6ZN04	569 aa	Known RBP	13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	ZNF627	Q7L945	461 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	GLB1L2	Q8IW92	636 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	DEPDC4	Q8N2C3	294 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	CYB561A3	Q8NBI2	242 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	PROKR2	Q8NFJ6	384 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	NMD3	Q96D46	503 aa	Known RBP	13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	BOD1	Q96IK1	185 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	DACH2	Q96NX9	599 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SPOCK3	Q9BQ16	436 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	FN3K	Q9H479	309 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SIAE	Q9HAT2	523 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	TMEM38B	Q9NVV0	291 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499	GMPPB	Q9Y5P6	360 aa		13.08	□□□□□ -0.32
KLHDC4-223	ENST00000568499		A0A096LPE4	126 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499		A0A1W2PPZ6	126 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SH3D21	A4FU49	640 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	OR6C68	A6NDL8	312 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	HLA-DQA2	P01906	255 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	CTLA4	P16410	223 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	GRN	P28799	593 aa	Known RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	LAP3	P28838	519 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	FOXG1	P55316	489 aa	Predicted RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	MRPS34	P82930	218 aa	Known RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	PPA1	Q15181	289 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SGCA	Q16586	387 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	TBRG1	Q3YBR2	411 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	TTC23	Q5W5X9	447 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	C12orf73	Q69YU5	71 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	ZBTB46	Q86UZ6	589 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	SLC22A24	Q8N4F4	322 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	TRUB1	Q8WWH5	349 aa	Known RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	BCL2L2	Q92843	193 aa	Predicted RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	ZNF837	Q96EG3	531 aa	Predicted RBP	13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	HRASLS5	Q96KN8	279 aa		13.07	□□□□□ -0.32
KLHDC4-223	ENST00000568499	WAC	Q9BTA9	647 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms