RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CD79AP11912 226 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 PPP1R8Q12972 351 aaKnown RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 TSPAN31Q12999 210 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 GSG1Q2KHT4 349 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 ZNF770Q6IQ21 691 aaPredicted RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 SLC25A47Q6Q0C1 308 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 DPY19L2P2Q6ZN68 376 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 OR9Q2Q8NGE9 314 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 NANOS1Q8WY41 292 aaKnown RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 MMADHCQ9H3L0 296 aaPredicted RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 DENND2DQ9H6A0 471 aaPredicted RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 REEP1Q9H902 201 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 SEC61A2Q9H9S3 476 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 NOX3Q9HBY0 568 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 POU2F3Q9UKI9 436 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 MOKQ9UQ07 419 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 UGT2A1Q9Y4X1 527 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 HEATR1Q9H583 2144 aaKnown RBP18.82■□□□□ 0.6
NME3-210ENST00000567271 VPS13CQ709C8 3753 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 TCRBV3S1A0A5B6 114 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 ATP6V1G2-DDX39BF2Z307 99 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 CCNB2O95067 398 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 UBL3O95164 117 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 FARS2O95363 451 aaKnown RBP18.81■□□□□ 0.6
NME3-210ENST00000567271 CELA3BP08861 270 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 RAB1AP62820 205 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 NAAAQ02083 359 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 PIGFQ07326 219 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 PGGHGQ32M88 737 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 RFX4Q33E94 735 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 MESTQ5EB52 335 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 GPR139Q6DWJ6 353 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 B3GLCTQ6Y288 498 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 MYPOPQ86VE0 399 aaPredicted RBP18.81■□□□□ 0.6
NME3-210ENST00000567271 FGFBP3Q8TAT2 258 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 FANK1Q8TC84 345 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 NSMAFQ92636 917 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 HTRA1Q92743 480 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 ZNF75AQ96N20 296 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 ZNF570Q96NI8 536 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 SH3GL3Q99963 347 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 LRMDAQ9H2I8 198 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 LAMP3Q9UQV4 416 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 SAMHD1Q9Y3Z3 626 aaKnown RBP18.81■□□□□ 0.6
NME3-210ENST00000567271 IER3IP1Q9Y5U9 82 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 ATP23Q9Y6H3 246 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 U3KQV3 271 aa18.81■□□□□ 0.6
NME3-210ENST00000567271 PLCE1Q9P212 2302 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 TEX13CA0A0J9YWL9 993 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 XKRYO14609 159 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 AHCYL1O43865 530 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 TMCC2O75069 709 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 TXNDC12O95881 172 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 CST1P01037 141 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 GASTP01350 101 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 CRYAAP02489 173 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 SOD3P08294 240 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 SDHAP31040 664 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 IDH3GP51553 393 aaPredicted RBP18.8■□□□□ 0.6
NME3-210ENST00000567271 MRPS34P82930 218 aaKnown RBP18.8■□□□□ 0.6
NME3-210ENST00000567271 NPRL3Q12980 569 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 MICAQ29983 383 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 TMEM171Q8WVE6 324 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 RASD2Q96D21 266 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 DHRS9Q9BPW9 319 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 OR52D1Q9H346 318 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 SIAEQ9HAT2 523 aa18.8■□□□□ 0.6
NME3-210ENST00000567271 PRRC2AP48634 2157 aaKnown RBP18.79■□□□□ 0.6
NME3-210ENST00000567271 SLC22A23A1A5C7 686 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 H7C1C5 153 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 MGRN1O60291 552 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 SMPD2O60906 423 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 PATE4P0C8F1 98 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 APEHP13798 732 aaKnown RBP18.79■□□□□ 0.6
NME3-210ENST00000567271 ZNF14P17017 642 aaPredicted RBP18.79■□□□□ 0.6
NME3-210ENST00000567271 NPR2P20594 1047 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 CALCRP30988 508 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 SLC6A6P31641 620 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 CDAP32320 146 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 GIPRP48546 466 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 RPS6KA3P51812 740 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 LCN6P62502 163 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 KRR1Q13601 381 aaKnown RBP18.79■□□□□ 0.6
NME3-210ENST00000567271 GK3PQ14409 553 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 SPNS3Q6ZMD2 512 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 PAPD5Q8NDF8 572 aaKnown RBP18.79■□□□□ 0.6
NME3-210ENST00000567271 KCNS3Q9BQ31 491 aa18.79■□□□□ 0.6
NME3-210ENST00000567271 MAP1AP78559 2803 aaPredicted RBP18.78■□□□□ 0.6
NME3-210ENST00000567271 PRSS37A4D1T9 235 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 PPP1R3DO95685 299 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 RAB36O95755 333 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 PTDSS1P48651 473 aaKnown RBP18.78■□□□□ 0.6
NME3-210ENST00000567271 ZNF620Q6ZNG0 422 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 SLC16A14Q7RTX9 510 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 DPPA2Q7Z7J5 298 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 LRRC75A-AS1Q8N1F1 130 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 AQP11Q8NBQ7 271 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 IL17RDQ8NFM7 739 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 NABP1Q96AH0 204 aa18.78■□□□□ 0.6
NME3-210ENST00000567271 SLCO4A1Q96BD0 722 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms