RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 HDDC2Q7Z4H3 204 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 PIGWQ7Z7B1 504 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 CPLX4Q7Z7G2 160 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 TREML1Q86YW5 311 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 OR4K5Q8NGD3 323 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 ASB10Q8WXI3 467 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 SGTBQ96EQ0 304 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 ZNF347Q96SE7 839 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 C1orf198Q9H425 327 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 C20orf141Q9NUB4 165 aa12.24□□□□□ -0.45
COMMD4-216ENST00000567023 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
COMMD4-216ENST00000567023 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 FAM220BPB1ANY3 271 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-216ENST00000567023 TRMUO75648 421 aaKnown RBP12.23□□□□□ -0.45
COMMD4-216ENST00000567023 TGFAP01135 160 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 PTHP01270 115 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 COX4I1P13073 169 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 AQP2P41181 271 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 DAP3P51398 398 aaKnown RBP12.23□□□□□ -0.45
COMMD4-216ENST00000567023 ZNF84P51523 738 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 CLRN1P58418 232 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 MRPS11P82912 194 aaKnown RBP12.23□□□□□ -0.45
COMMD4-216ENST00000567023 SLC36A2Q495M3 483 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 CYBRD1Q53TN4 286 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 C10orf128Q5T292 105 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 TMEM53Q6P2H8 277 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 DEF8Q6ZN54 512 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 PHC2Q8IXK0 858 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 POU5F2Q8N7G0 328 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 NOXO1Q8NFA2 376 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 SYT3Q9BQG1 590 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 SMURF2Q9HAU4 748 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 INIPQ9NRY2 104 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 A4GNTQ9UNA3 340 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 MED31Q9Y3C7 131 aa12.23□□□□□ -0.45
COMMD4-216ENST00000567023 ELOVL7A1L3X0 281 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-216ENST00000567023 MMP7P09237 267 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-216ENST00000567023 ZNF250P15622 560 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 SRD5A1P18405 259 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 ST3GAL3Q11203 375 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 SLC16A14Q7RTX9 510 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 PAQR4Q8N4S7 273 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-216ENST00000567023 SYT14Q8NB59 555 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 OR2T12Q8NG77 320 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 RCN3Q96D15 328 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 NMD3Q96D46 503 aaKnown RBP12.22□□□□□ -0.45
COMMD4-216ENST00000567023 CHODLQ9H9P2 273 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
COMMD4-216ENST00000567023 HIF3AQ9Y2N7 669 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 AP3M1Q9Y2T2 418 aa12.22□□□□□ -0.45
COMMD4-216ENST00000567023 IGLV3-9A0A075B6K5 115 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 LYNX1G3V0Z9 82 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 HPXP02790 462 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 LYNX1P0DP58 116 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 HNF1AP20823 631 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 ACHEP22303 614 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 IL2RGP31785 369 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 RAD52P43351 418 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 UCP2P55851 309 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 TMEM33P57088 247 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 MRPS34P82930 218 aaKnown RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 TAF11Q15544 211 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 TRIP10Q15642 601 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 LRRC23Q53EV4 343 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 C8orf82Q6P1X6 216 aaPredicted RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 MICU2Q8IYU8 434 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 LINC01356Q8N9X3 169 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 MOSPD2Q8NHP6 518 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 ZNF519Q8TB69 540 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 HDAC2Q92769 488 aaKnown RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 RDH5Q92781 318 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 PRRC1Q96M27 445 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 SNX18Q96RF0 628 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 BCL2L14Q9BZR8 327 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 TXNIPQ9H3M7 391 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 RNF121Q9H920 327 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 DUSP13Q9UII6 198 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 ZNF346Q9UL40 294 aaKnown RBP12.21□□□□□ -0.45
COMMD4-216ENST00000567023 FZR1Q9UM11 496 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 UGT2A1Q9Y4X1 527 aa12.21□□□□□ -0.45
COMMD4-216ENST00000567023 IQCMA0A1B0GVH7 501 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 IGHMP01871 453 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms