RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 M0R3H8 397 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 SNNO75324 88 aaPredicted RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 OR6A2O95222 327 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 CH25HO95992 272 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 QDPRP09417 244 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 DRD4P21917 467 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 CCNOP22674 350 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 ZNF81P51508 661 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 MMEL1Q495T6 779 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 MIDNQ504T8 468 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 SLC16A14Q7RTX9 510 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 RETREG3Q86VR2 466 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 LRRC18Q8N456 261 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 LRRC17Q8N6Y2 441 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 GOLGA6L1Q8N7Z2 621 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 OR1J1Q8NGS3 322 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 ZNF566Q969W8 418 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 ELMOD3Q96FG2 381 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 ZNF48Q96MX3 618 aaPredicted RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 ZNF347Q96SE7 839 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 RAD21L1Q9H4I0 556 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 IKZF5Q9H5V7 419 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 NTN4Q9HB63 628 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 TAS2R5Q9NYW4 299 aa13.12□□□□□ -0.31
PALB2-205ENST00000567003 LEF1Q9UJU2 399 aaPredicted RBP13.12□□□□□ -0.31
PALB2-205ENST00000567003 KPNA4O00629 521 aaPredicted RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 UBDO15205 165 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 RNF13O43567 381 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 SNAP29O95721 258 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 PGA4P0DJD7 388 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 PGA3P0DJD8 388 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 PRTN3P24158 256 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 SCARB2Q14108 478 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 KLF17Q5JT82 389 aaPredicted RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 THEM4Q5T1C6 240 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 DOK3Q7L591 496 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 KRT73Q86Y46 540 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 SMYD1Q8NB12 490 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 THAP1Q9NVV9 213 aa13.11□□□□□ -0.31
PALB2-205ENST00000567003 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
PALB2-205ENST00000567003 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 UBOX5O94941 541 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 MFN2O95140 757 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 LYPD3O95274 346 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 MT-ATP6P00846 226 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 IGHV3-13P01766 116 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 THY1P04216 161 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 MMP7P09237 267 aaPredicted RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 GATA3P23771 443 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 WNT5AP41221 380 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 MMP15P51511 669 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 HSF2Q03933 536 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 BAMBIQ13145 260 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 NPTX1Q15818 432 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 ZNF74Q16587 644 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 RANBP3LQ86VV4 465 aaPredicted RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 ZNF101Q8IZC7 436 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 SYT14Q8NB59 555 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 MCHR1Q99705 422 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 SPATA5L1Q9BVQ7 753 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 BCL2L14Q9BZR8 327 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 C1orf198Q9H425 327 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
PALB2-205ENST00000567003 SLC13A4Q9UKG4 626 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 TRIM33Q9UPN9 1127 aa13.1□□□□□ -0.31
PALB2-205ENST00000567003 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
PALB2-205ENST00000567003 IGHV3OR16-10A0A075B7F0 116 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 IQCMA0A1B0GVH7 501 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 MT-ND5P03915 603 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 OPN1SWP03999 348 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 CDAP32320 146 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 APLNRP35414 380 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 CLRN1P58418 232 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 SEC61A1P61619 476 aaKnown RBP13.09□□□□□ -0.31
PALB2-205ENST00000567003 PLP2Q04941 152 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 PAGE3Q5JUK9 113 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms