RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 SLC35F2Q8IXU6 374 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 ACBD7Q8N6N7 88 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 RORBQ92753 470 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 TMEM54Q969K7 222 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 MND1Q9BWT6 205 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 GLTPQ9NZD2 209 aa27.12■■□□□ 1.93
CTCF-203ENST00000566078 INMTO95050 263 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 TGM6O95932 706 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 LIMS3P0CW19 117 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 LIMS4P0CW20 117 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 FCGR2AP12318 317 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 NR2C1P13056 603 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 NTF4P34130 210 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 BLVRAP53004 296 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 ACTC1P68032 377 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 ACTA1P68133 377 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 GLO1Q04760 184 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 LHFPL3Q86UP9 236 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 FCGR1BQ92637 280 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 MCHR2Q969V1 340 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 TMEM45BQ96B21 275 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 TMIGD2Q96BF3 282 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 ERVK13-1Q9NX77 482 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 CLEC4AQ9UMR7 237 aa27.11■■□□□ 1.93
CTCF-203ENST00000566078 ZNF99A8MXY4 864 aaPredicted RBP27.1■■□□□ 1.93
CTCF-203ENST00000566078 SLC43A1O75387 559 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 RAB39AQ14964 217 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 KRTCAP3Q53RY4 240 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 UBE2UQ5VVX9 321 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 P4HA3Q7Z4N8 544 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 ADGRE4PQ86SQ3 457 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 TUSC5Q8IXB3 177 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 TIGD4Q8IY51 512 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 TRIB1Q96RU8 372 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 BCO1Q9HAY6 547 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 CLCF1Q9UBD9 225 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 NOSIPQ9Y314 301 aaKnown RBP27.1■■□□□ 1.93
CTCF-203ENST00000566078 ITPR1Q14643 2758 aa27.1■■□□□ 1.93
CTCF-203ENST00000566078 DAPL1A0PJW8 107 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 QDPRP09417 244 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 HCCSP53701 268 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 PHYHD1Q5SRE7 291 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 SLC25A47Q6Q0C1 308 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 C19orf48Q6RUI8 117 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 SLC16A9Q7RTY1 509 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 NANOGP1Q8N7R0 232 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 INTS14Q96SY0 518 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 MARCH7Q9H992 704 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 RNF122Q9H9V4 155 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 INPP5EQ9NRR6 644 aa27.09■■□□□ 1.93
CTCF-203ENST00000566078 FOXD3Q9UJU5 478 aaPredicted RBP27.09■■□□□ 1.93
CTCF-203ENST00000566078 ZNF724A8MTY0 619 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 PSMB9P28065 219 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 PTGS2P35354 604 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 MED22Q15528 200 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 C20orf196Q8IYI0 205 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 SLC25A18Q9H1K4 315 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 WDR76Q9H967 626 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 CALHM2Q9HA72 323 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 LRFN4Q6PJG9 635 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 ZNF367Q7RTV3 350 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 GPR141Q7Z602 305 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 ZSCAN2Q7Z7L9 614 aaPredicted RBP27.08■■□□□ 1.93
CTCF-203ENST00000566078 OR6N2Q8NGY6 317 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 INTS12Q96CB8 462 aaKnown RBP27.08■■□□□ 1.93
CTCF-203ENST00000566078 OR5M11Q96RB7 305 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 ZNF649Q9BS31 505 aa27.08■■□□□ 1.93
CTCF-203ENST00000566078 MRPL22Q9NWU5 206 aaKnown RBP27.08■■□□□ 1.93
CTCF-203ENST00000566078 LSM2Q9Y333 95 aaKnown RBP27.08■■□□□ 1.93
CTCF-203ENST00000566078 FREM1Q5H8C1 2179 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 A0A1W2PPL8 197 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 TMEM129A0AVI4 362 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 OR2T7P0C7T2 308 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 GAAP10253 952 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 CD79BP40259 229 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 TDGF1P3P51864 188 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 GP2P55259 537 aaKnown RBP27.07■■□□□ 1.92
CTCF-203ENST00000566078 OTPQ5XKR4 325 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 ZNF585AQ6P3V2 769 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 ZC3HAV1Q7Z2W4 902 aaKnown RBP27.07■■□□□ 1.92
CTCF-203ENST00000566078 GLB1L2Q8IW92 636 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 RFLNBQ8N5W9 214 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 OR2T27Q8NH04 317 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 ALG8Q9BVK2 526 aa27.07■■□□□ 1.92
CTCF-203ENST00000566078 A0A1W2PQL4 384 aaPredicted RBP27.06■■□□□ 1.92
CTCF-203ENST00000566078 MRPL33O75394 65 aaKnown RBP27.06■■□□□ 1.92
CTCF-203ENST00000566078 YES1P07947 543 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 ZNF85Q03923 595 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 KLRB1Q12918 225 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 PRR30Q53SZ7 412 aaPredicted RBP27.06■■□□□ 1.92
CTCF-203ENST00000566078 OR2G6Q5TZ20 316 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 KLHL36Q8N4N3 616 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 SLC26A10Q8NG04 563 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 TTTY10Q9BZA0 68 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 ULBP2Q9BZM5 246 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 COPS3Q9UNS2 423 aa27.06■■□□□ 1.92
CTCF-203ENST00000566078 AHRRA9YTQ3 701 aa27.05■■□□□ 1.92
CTCF-203ENST00000566078 MPZL1O95297 269 aa27.05■■□□□ 1.92
CTCF-203ENST00000566078 MEP1BQ16820 701 aa27.05■■□□□ 1.92
CTCF-203ENST00000566078 ACSF3Q4G176 576 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms