RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ZNF133P52736 654 aaPredicted RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 CDK5Q00535 292 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 ROR2Q01974 943 aaKnown RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 RUNX1T1Q06455 604 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 GINS1Q14691 196 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 PGGHGQ32M88 737 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 MESTQ5EB52 335 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 OR7E24Q6IFN5 339 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 C1orf162Q8NEQ5 155 aaPredicted RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 STEAP2Q8NFT2 490 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 KISS1RQ969F8 398 aaPredicted RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 RASD2Q96D21 266 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 RDH12Q96NR8 316 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 ALKBH3Q96Q83 286 aaPredicted RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 CRLF2Q9HC73 371 aa22.8■■□□□ 1.24
NME3-208ENST00000565379 VSX1Q9NZR4 365 aaPredicted RBP22.8■■□□□ 1.24
NME3-208ENST00000565379 SOCS2O14508 198 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 PPP3CBP16298 524 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 IGHV1-2P23083 117 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 CD47Q08722 323 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 NPRL3Q12980 569 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 STAC2Q6ZMT1 411 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 SSX8Q7RTT4 187 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 CXorf67Q86X51 503 aaPredicted RBP22.79■■□□□ 1.24
NME3-208ENST00000565379 OR4Q3Q8NH05 313 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 MCHR2Q969V1 340 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 BOD1Q96IK1 185 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 VCXQ9H320 206 aa22.79■■□□□ 1.24
NME3-208ENST00000565379 PRRC2AP48634 2157 aaKnown RBP22.79■■□□□ 1.24
NME3-208ENST00000565379 A6NNC1 897 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 MITFO75030 526 aaPredicted RBP22.78■■□□□ 1.24
NME3-208ENST00000565379 RENP00797 406 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 QDPRP09417 244 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 HIST1H1CP16403 213 aaKnown RBP22.78■■□□□ 1.24
NME3-208ENST00000565379 IL32P24001 234 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 UGT2B10P36537 528 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 ART1P52961 327 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 FAM27E3Q08E93 113 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 PTGES3Q15185 160 aaKnown RBP22.78■■□□□ 1.24
NME3-208ENST00000565379 C10orf128Q5T292 105 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 OGFRL1Q5TC84 451 aaPredicted RBP22.78■■□□□ 1.24
NME3-208ENST00000565379 WDFY1Q8IWB7 410 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 ZNF433Q8N7K0 673 aaPredicted RBP22.78■■□□□ 1.24
NME3-208ENST00000565379 SYT14Q8NB59 555 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 FAM222BQ8WU58 562 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 SLC29A1Q99808 456 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 CMC2Q9NRP2 79 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 RASSF1Q9NS23 344 aa22.78■■□□□ 1.24
NME3-208ENST00000565379 CIB4A0PJX0 185 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 SLC22A23A1A5C7 686 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 FAM221AA4D161 298 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 RIIAD1A6NNX1 92 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 DHHO43323 396 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 ITGA5P08648 1049 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 ZNF84P51523 738 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.77■■□□□ 1.24
NME3-208ENST00000565379 LGALS3BPQ08380 585 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 CEACAM16Q2WEN9 425 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 PHYHD1Q5SRE7 291 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 LRFN4Q6PJG9 635 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 DNM1P34Q6PK57 102 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 P2RY8Q86VZ1 359 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 C17orf78Q8N4C9 275 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 OR52E2Q8NGJ4 325 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 OR4K13Q8NH42 304 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 NMD3Q96D46 503 aaKnown RBP22.77■■□□□ 1.24
NME3-208ENST00000565379 SLC38A2Q96QD8 506 aa22.77■■□□□ 1.24
NME3-208ENST00000565379 CLEC4MQ9H2X3 399 aaPredicted RBP22.77■■□□□ 1.24
NME3-208ENST00000565379 NKX1-2Q9UD57 310 aaPredicted RBP22.77■■□□□ 1.24
NME3-208ENST00000565379 ALPK2Q86TB3 2170 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 TUBAL3A6NHL2 446 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 ZNF99A8MXY4 864 aaPredicted RBP22.76■■□□□ 1.23
NME3-208ENST00000565379 HOXB1P14653 301 aaPredicted RBP22.76■■□□□ 1.23
NME3-208ENST00000565379 ZNF3P17036 446 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 PEX2P28328 305 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 CRABP1P29762 137 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 CDKN2AP42771 156 aaKnown RBP22.76■■□□□ 1.23
NME3-208ENST00000565379 NRN1LQ496H8 165 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 SLC35F1Q5T1Q4 408 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 LPCAT4Q643R3 524 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 LEG1Q6P5S2 330 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 ZNF627Q7L945 461 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 LINGO2Q7L985 606 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 BHLHA15Q7RTS1 189 aaPredicted RBP22.76■■□□□ 1.23
NME3-208ENST00000565379 MUS81Q96NY9 551 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 RIBC2Q9H4K1 309 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 FREM1Q5H8C1 2179 aa22.76■■□□□ 1.23
NME3-208ENST00000565379 ZFHX3Q15911 3703 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 ZAR1LA6NP61 321 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 ATP6V1G2O95670 118 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 PAX7P23759 505 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 SLX4IPQ5VYV7 408 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 ANKRD16Q6P6B7 361 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 SLC25A47Q6Q0C1 308 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 PTCHD4Q6ZW05 846 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 CDC20BQ86Y33 519 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 IQCF1Q8N6M8 205 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 PLEKHA8Q96JA3 519 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 NMNAT3Q96T66 252 aa22.75■■□□□ 1.23
NME3-208ENST00000565379 VCX3BQ9H321 246 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms