RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-206	ENST00000564934	C11orf44	Q8N8P7	122 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	CCDC63	Q8NA47	563 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	DACT3	Q96B18	629 aa	Predicted RBP	10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	THOC1	Q96FV9	657 aa	Known RBP	10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	BCL2L14	Q9BZR8	327 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	ATAD3A	Q9NVI7	634 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	TMED5	Q9Y3A6	229 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	USH1C	Q9Y6N9	552 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	DNAH9	Q9NYC9	4486 aa		10.85	□□□□□ -0.67
RPAP1-206	ENST00000564934	WDR91	A4D1P6	747 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	CEACAM18	A8MTB9	384 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	TNFRSF13B	O14836	293 aa	Predicted RBP	10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	LSM1	O15116	133 aa	Known RBP	10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	PLIN3	O60664	434 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	NPIPB7	O75200	414 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	AHSA1	O95433	338 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	PROC	P04070	461 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	RPS5	P46782	204 aa	Known RBP	10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	GNB2	P62879	340 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	HPCA	P84074	193 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	ZNF774	Q6NX45	483 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	GDPGP1	Q6ZNW5	385 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	SKA3	Q8IX90	412 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	MFSD8	Q8NHS3	518 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	EMC6	Q9BV81	110 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	PTDSS2	Q9BVG9	487 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	ULBP2	Q9BZM5	246 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	B3GAT2	Q9NPZ5	323 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	TCF7L2	Q9NQB0	619 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	EMCN	Q9ULC0	261 aa		10.84	□□□□□ -0.67
RPAP1-206	ENST00000564934	KIR2DS1	A0A191URI9	304 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	ATP5H	O75947	161 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	TSPAN9	O75954	239 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	MFN2	O95140	757 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	SNAP29	O95721	258 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	AGR2	O95994	175 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	BPGM	P07738	259 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	SFTPB	P07988	381 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	ADH4	P08319	380 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	WNT2	P09544	360 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	LINC00032	P0C843	101 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	MPV17	P39210	176 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	IER3	P46695	156 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	PTGR1	Q14914	329 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	TBC1D28	Q2M2D7	210 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	GPAT3	Q53EU6	434 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	SPATA46	Q5T0L3	261 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	MRPL2	Q5T653	305 aa	Known RBP	10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	FRMD7	Q6ZUT3	714 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	NUDCD3	Q8IVD9	361 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	ZNF283	Q8N7M2	679 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	OR1J1	Q8NGS3	322 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	MIPOL1	Q8TD10	442 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	OCSTAMP	Q9BR26	566 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	SIKE1	Q9BRV8	207 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	MECR	Q9BV79	373 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	TUBB1	Q9H4B7	451 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934	FIS1	Q9Y3D6	152 aa		10.83	□□□□□ -0.68
RPAP1-206	ENST00000564934		M0R082	166 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	HNRNPCL1	O60812	293 aa	Known RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	GKN3P	P0CG01	181 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	CPA3	P15088	417 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	RPS2	P15880	293 aa	Known RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	UQCRC2	P22695	453 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	MDH2	P40926	338 aa	Known RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	TNFAIP6	P98066	277 aa	Predicted RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	NRN1L	Q496H8	165 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	WBP2NL	Q6ICG8	309 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	SNX32	Q86XE0	403 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	C10orf67	Q8IYJ2	551 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	CLECL1	Q8IZS7	167 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	MIER2	Q8N344	545 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	KRTCAP2	Q8N6L1	136 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	NATD1	Q8N6N6	113 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	ZNF417	Q8TAU3	575 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	PNPT1	Q8TCS8	783 aa	Known RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	COQ8B	Q96D53	544 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	LRR1	Q96L50	414 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	SIGLEC11	Q96RL6	698 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	ARHGDIG	Q99819	225 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	PCGF1	Q9BSM1	259 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934	RLIM	Q9NVW2	624 aa		10.82	□□□□□ -0.68
RPAP1-206	ENST00000564934		A0A096LPI6	279 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	TMEM114	B3SHH9	223 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	C3orf84	H3BNL1	204 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	AIM2	O14862	343 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	DNAJC8	O75937	253 aa	Predicted RBP	10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	CD55	P08174	381 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	MYL2	P10916	166 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	HLA-DOB	P13765	273 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	BGN	P21810	368 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	ACAA2	P42765	397 aa	Known RBP	10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	COPZ1	P61923	177 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	THEM4	Q5T1C6	240 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	KLB	Q86Z14	1044 aa		10.81	□□□□□ -0.68
RPAP1-206	ENST00000564934	MUC20	Q8N307	709 aa	Predicted RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms