RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TIGITQ495A1 244 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CYBRD1Q53TN4 286 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 RBMS3Q6XE24 437 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 LRRTM1Q86UE6 522 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 C1orf210Q8IVY1 113 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ETFBKMTQ8IXQ9 262 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 OR51A4Q8NGJ6 313 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 LOXL4Q96JB6 756 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ALPK1Q96QP1 1244 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 LMAN1LQ9HAT1 526 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 IL19Q9UHD0 177 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 KCNE1BA0A087WTH5 132 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 A0A1B0GVT2 93 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 A0A1W2PR48 441 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 LILRB5O75023 590 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 WNT1P04628 370 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GUSBP08236 651 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 HTR1AP08908 422 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 IGFBP5P24593 272 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 THBS4P35443 961 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 AQP2P41181 271 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 BPIFB3P59826 476 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 IL11RAQ14626 422 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ZNF528Q3MIS6 628 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ARHGEF39Q8N4T4 335 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 PINX1Q96BK5 328 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 SGK3Q96BR1 496 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NICN1Q9BSH3 213 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ADAM19Q9H013 955 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 SLC38A1Q9H2H9 487 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 OR51I1Q9H343 314 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 C1orf123Q9NWV4 160 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 DHDHQ9UQ10 334 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 RNF6Q9Y252 685 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TP53TG5Q9Y2B4 290 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 OBSL1O75147 1896 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 A0A0D9SG52 128 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NPIPB13A6NJU9 1138 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NPIPB4C9JG80 1138 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NDUFA2O43678 99 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GALR3O60755 368 aaPredicted RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 RECKO95980 971 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 H1F0P07305 194 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 CHRM2P08172 466 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CELA2AP08217 269 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CEBPGP53567 150 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 RPS18P62269 152 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 RBMS2Q15434 407 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 RFPL4BQ6ZWI9 263 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GRINAQ7Z429 371 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CADM3Q8N126 398 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 WDR31Q8NA23 367 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TMEM204Q9BSN7 226 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 SLC12A9Q9BXP2 914 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GAREM1Q9H706 876 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 UBQLN4Q9NRR5 601 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ALPK3Q96L96 1907 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 C1orf196B1AJZ1 125 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 EIF4EP06730 217 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 PIPP12273 146 aaPredicted RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 KLK2P20151 261 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ITPKBP27987 946 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 F2RL1P55085 397 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TARDBPQ13148 414 aaKnown RBP eCLIP3.07□□□□□ -1.921e-7■■■■□ 25.2
CHD9-213ENST00000564845 SGPP2Q8IWX5 399 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 WDR20Q8TBZ3 569 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CREB3L4Q8TEY5 395 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TMEM45BQ96B21 275 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 SLC35G5Q96KT7 338 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 DMRTB1Q96MA1 342 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 MAP3K3Q99759 626 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NDFIP1Q9BT67 221 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 C19orf24Q9BVV8 132 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GPR87Q9BY21 358 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 RTN4RQ9BZR6 473 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TVP23BQ9NYZ1 205 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 APOBEC3BQ9UH17 382 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 UBQLN2Q9UHD9 624 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 PADI1Q9ULC6 663 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 COPS3Q9UNS2 423 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 DAPL1A0PJW8 107 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 EMC8O43402 210 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 RAB3DO95716 219 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 HMGN2P05204 90 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A6P0DMU7 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A5P0DMU8 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A7P0DMV0 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A8P0DMV1 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A9P0DMV2 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 HOXB1P14653 301 aaPredicted RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 ST6GAL1P15907 406 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GABRG2P18507 467 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 BDKRB2P30411 391 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CTHP32929 405 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 AFF3P51826 1226 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 SCARB2Q14108 478 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NRN1LQ496H8 165 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CT45A2Q5DJT8 189 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 PDZD11Q5EBL8 140 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms