RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PDZK1IP1Q13113 114 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 STX5Q13190 355 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 CEACAM7Q14002 265 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ATP6AP1Q15904 470 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 WSCD2Q2TBF2 565 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZNF542PQ5EBM4 170 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZNF506Q5JVG8 444 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 RIPPLY2Q5TAB7 128 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ATF7IP2Q5U623 682 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 NKAIN2Q5VXU1 208 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 RAET1GQ6H3X3 334 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 TCEAL6Q6IPX3 200 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 SLC8B1Q6J4K2 584 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 EPGNQ6UW88 154 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 DHRS11Q6UWP2 260 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 FAM159AQ6UWV7 190 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 WDR88Q6ZMY6 472 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 C16orf62Q7Z3J2 963 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 STX12Q86Y82 276 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 HIPK1Q86Z02 1210 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 BBS7Q8IWZ6 715 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 PDIK1LQ8N165 341 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 CBR4Q8N4T8 237 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZNF781Q8N8C0 355 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 FNDC5Q8NAU1 212 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZNF540Q8NDQ6 660 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 OR4Q3Q8NH05 313 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 MCFD2Q8NI22 146 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZFAND1Q8TCF1 268 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 MCOLN3Q8TDD5 553 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 GANCQ8TET4 914 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 C2orf15Q8WU43 125 aaKnown RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 DNAJA4Q8WW22 397 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 FAM3CQ92520 227 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 SMARCD2Q92925 531 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 GLYATL1Q969I3 302 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 MARC2Q969Z3 335 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ESAMQ96AP7 390 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 CLDN23Q96B33 292 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 RCN3Q96D15 328 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 DNAJC19Q96DA6 116 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 NXPE2Q96DL1 559 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 SSX3Q99909 188 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 APOL4Q9BPW4 351 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 TTYH2Q9BSA4 534 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 CNPY3Q9BT09 278 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 NTMT1Q9BV86 223 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 POLR3FQ9H1D9 316 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 DSN1Q9H410 356 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 SAV1Q9H4B6 383 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 WDR41Q9HAD4 459 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 UBE2TQ9NPD8 197 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 NGBQ9NPG2 151 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 IL1RAPQ9NPH3 570 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 HPS4Q9NQG7 708 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 FAM212BQ9NTI7 297 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 SLC35D1Q9NTN3 355 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 PAK1IP1Q9NWT1 392 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 SOHLH2Q9NX45 425 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 RAB20Q9NX57 234 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 TMEM216Q9P0N5 145 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 UXTQ9UBK9 157 aaPredicted RBP3.09□□□□□ -1.91
CHD9-212ENST00000564641 DCDC2Q9UHG0 476 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 GLS2Q9UI32 602 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 IKZF3Q9UKT9 509 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 NSG2Q9Y328 171 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 ZNF175Q9Y473 711 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 CACNG2Q9Y698 323 aa3.09□□□□□ -1.91
CHD9-212ENST00000564641 DMDP11532 3685 aa3.09□□□□□ -1.92
CHD9-212ENST00000564641 PLXNA3P51805 1871 aa3.09□□□□□ -1.92
CHD9-212ENST00000564641 CACNA1GO43497 2377 aa3.09□□□□□ -1.92
CHD9-212ENST00000564641 FRYLO94915 3013 aa3.09□□□□□ -1.92
CHD9-212ENST00000564641 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.92
CHD9-212ENST00000564641 DMXL1Q9Y485 3027 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 A0A0X1KG70 313 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PNMA8CA0A1B0GUJ8 204 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TCRBV3S1A0A5B6 114 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RPL37AP8A6NKH3 93 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 A8MUA0 341 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 K7EQG2 157 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 E2F3O00716 465 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CYB561D2O14569 222 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CHADO15335 359 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CCL16O15467 120 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 GATCO43716 136 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 BANF1O75531 89 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SRP72O76094 671 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 RHOBTB1O94844 696 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PROSCO94903 275 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SLITRK3O94933 977 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SNX4O95219 450 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 VAPBO95292 243 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 IFNB1P01574 187 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 EPOP01588 193 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PROS1P07225 676 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 DCNP07585 359 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 IFI30P13284 250 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 GTF2E2P29084 291 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 HOXA6P31267 233 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms