RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 NRIP2Q9BQI9 281 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 TMEM246Q9BRR3 403 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 SIAEQ9HAT2 523 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 LY9Q9HBG7 655 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 NT5MQ9NPB1 228 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 DAZ3Q9NR90 486 aaKnown RBP3.2□□□□□ -1.9
LINC00560-201ENST00000564593 RPS6KB2Q9UBS0 482 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 CTNNA3Q9UI47 895 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 MYH6P13533 1939 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 WNK3Q9BYP7 1800 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 LRP6O75581 1613 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 LAMB2P55268 1798 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 PALLDQ8WX93 1383 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MYH13Q9UKX3 1938 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MED23Q9ULK4 1368 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 A0A0G2JLM5 398 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 VPS37CA5D8V6 355 aaPredicted RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 H3BQV1 296 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 NEMFO60524 1076 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 CASP14P31944 242 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 BTCP35070 178 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 DRD3P35462 400 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 HSD17B2P37059 387 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 ERVK-25P63136 954 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 SASS6Q6UVJ0 657 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 CCDC73Q6ZRK6 1079 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 CDH26Q8IXH8 852 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 PIANPQ8IYJ0 282 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 ACOT11Q8WXI4 607 aaPredicted RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MYDGFQ969H8 173 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 TUBGCP3Q96CW5 907 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 SLC35E1Q96K37 410 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 ZNF396Q96N95 335 aaPredicted RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MS4A4EQ96PG1 132 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MBOAT4Q96T53 435 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 RIOK2Q9BVS4 552 aaKnown RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 FAIM2Q9BWQ8 316 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 UPF3BQ9BZI7 483 aaKnown RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 OR11A1Q9GZK7 315 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 MMP26Q9NRE1 261 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 KLHL28Q9NXS3 571 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 IKZF2Q9UKS7 526 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 SLC25A15Q9Y619 301 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 DDX60Q8IY21 1712 aaKnown RBP3.19□□□□□ -1.9
LINC00560-201ENST00000564593 WDR19Q8NEZ3 1342 aa3.19□□□□□ -1.9
LINC00560-201ENST00000564593 COL22A1Q8NFW1 1626 aaPredicted RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 IGLV3-22A0A075B6J6 115 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 KIR2DL5BA0A0G2JN68 375 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 KIR2DL5BA0A0G2JPC4 375 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 XKRY2A2RUG3 117 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 TRIM49D1C9J1S8 452 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 GOLGA6L19H0YKK7 550 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 TRAF3IP2O43734 574 aaPredicted RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 ZNF861PO60384 105 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 TNFSF13O75888 250 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 CIAO1O76071 339 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 NDUFB10O96000 172 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 SYT1P21579 422 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 FDFT1P37268 417 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 CYTH1Q15438 398 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 HSP90AB3PQ58FF7 597 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 KDM7AQ6ZMT4 941 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 PSTKQ8IV42 348 aaKnown RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 TMEM61Q8N0U2 210 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 KIR2DL5AQ8N109 375 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 Q8N7P7 452 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 LINC01555Q8NAE3 123 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 OR4F6Q8NGB9 312 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 KIR2DL5BQ8NHK3 375 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 NDRG1Q92597 394 aaKnown RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 RDH5Q92781 318 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 SMARCD2Q92925 531 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 HES7Q9BYE0 225 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 MFFQ9GZY8 342 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 NXF3Q9H4D5 531 aaKnown RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 RRAGDQ9NQL2 400 aaPredicted RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 GLRX2Q9NS18 164 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 NYAP2Q9P242 653 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 MYH2Q9UKX2 1941 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 ITGB4P16144 1822 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 NHSL1Q5SYE7 1610 aa3.18□□□□□ -1.9
LINC00560-201ENST00000564593 CICQ96RK0 1608 aaPredicted RBP3.18□□□□□ -1.9
LINC00560-201ENST00000564593 COL14A1Q05707 1796 aaKnown RBP3.17□□□□□ -1.9
LINC00560-201ENST00000564593 A0A1W2PPV9 198 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 C12orf71A8MTZ7 269 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
LINC00560-201ENST00000564593 PSTPIP1O43586 416 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 ERLIN2O94905 339 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 INSP01308 110 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 IGHV4-34P06331 123 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 UQCRFS1P1P0C7P4 283 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 MCF2P10911 925 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 SFTPCP11686 197 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 CCNE1P24864 410 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 NUDT1P36639 197 aa3.17□□□□□ -1.9
LINC00560-201ENST00000564593 CRYBB2P43320 205 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms