RNA–Protein interactions for RNA: ENST00000564574.5

CLN3-212, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,159 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-212ENST00000564574 MPGP29372 298 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 CENPAP49450 140 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 ASCL1P50553 236 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 SH3BGRP55822 239 aaPredicted RBP18.18■□□□□ 0.5
CLN3-212ENST00000564574 FMODQ06828 376 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 LGALS3BPQ08380 585 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 P2RY6Q15077 328 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 SLC25A30Q5SVS4 291 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 C6orf52Q5T4I8 152 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 LINGO2Q7L985 606 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 CPOQ8IVL8 374 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 C8orf59Q8N0T1 100 aaPredicted RBP18.18■□□□□ 0.5
CLN3-212ENST00000564574 GABRG1Q8N1C3 465 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 FAM26EQ8N5C1 309 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 CRLF2Q9HC73 371 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 ELOVL5Q9NYP7 299 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 B9D1Q9UPM9 204 aa18.18■□□□□ 0.5
CLN3-212ENST00000564574 DIDO1Q9BTC0 2240 aaKnown RBP18.17■□□□□ 0.5
CLN3-212ENST00000564574 PRODHO43272 600 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 CTLA4P16410 223 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 COX5AP20674 150 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 CEACAM16Q2WEN9 425 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 MEDAGQ5VYS4 303 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 NXNL2Q5VZ03 156 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 PLBD1Q6P4A8 553 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 ZNF474Q6S9Z5 364 aaPredicted RBP18.17■□□□□ 0.5
CLN3-212ENST00000564574 LUZP2Q86TE4 346 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 ENTHD1Q8IYW4 607 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 CA5BP1Q8WTZ4 195 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 PTP4A1Q93096 173 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 LRRC46Q96FV0 321 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 MUS81Q96NY9 551 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 IL4I1Q96RQ9 567 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 RBM24Q9BX46 236 aaKnown RBP18.17■□□□□ 0.5
CLN3-212ENST00000564574 Q9H521 79 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 SRA1Q9HD15 236 aaKnown RBP18.17■□□□□ 0.5
CLN3-212ENST00000564574 ZNF226Q9NYT6 803 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 TAS2R16Q9NYV7 291 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 H2AFY2Q9P0M6 372 aaPredicted RBP18.17■□□□□ 0.5
CLN3-212ENST00000564574 MOKQ9UQ07 419 aa18.17■□□□□ 0.5
CLN3-212ENST00000564574 IGLV1-36A0A0B4J1U3 117 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 IGKV1D-43A0A0B4J1Z2 117 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 FAM183AA6NL82 134 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 ZNF99A8MXY4 864 aaPredicted RBP18.16■□□□□ 0.5
CLN3-212ENST00000564574 M0R129 80 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 SPI1P17947 270 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 GABRB1P18505 474 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 BLVRAP53004 296 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 IL5RAQ01344 420 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 TGFBR3Q03167 851 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 OCLNQ16625 522 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 FBXL19-AS1Q494R0 122 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 NRN1LQ496H8 165 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 SLC35D3Q5M8T2 416 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 AADACL4Q5VUY2 407 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 GID4Q8IVV7 300 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 OR6V1Q8N148 313 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 OR9Q1Q8NGQ5 310 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 RHOXF1Q8NHV9 184 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 OTULINQ96BN8 352 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 Q96MT0 163 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 TSSK2Q96PF2 358 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 ANKRD60Q9BZ19 345 aa18.16■□□□□ 0.5
CLN3-212ENST00000564574 DCTN6O00399 190 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 ZG16O60844 167 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 CLIC3O95833 236 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 ITGA5P08648 1049 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 IGHV1-2P23083 117 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 GUCA1AP43080 201 aaPredicted RBP18.15■□□□□ 0.5
CLN3-212ENST00000564574 TEKQ02763 1124 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 FOXL2NBQ6ZUU3 175 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 ZNF627Q7L945 461 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 THAP5Q7Z6K1 395 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 PROKR2Q8NFJ6 384 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 ITLN2Q8WWU7 325 aaPredicted RBP18.15■□□□□ 0.5
CLN3-212ENST00000564574 NSMAFQ92636 917 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 FOXB1Q99853 325 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 HCAR1Q9BXC0 346 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 RERGLQ9H628 205 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 MED20Q9H944 212 aa18.15■□□□□ 0.5
CLN3-212ENST00000564574 FLNBO75369 2602 aaKnown RBP18.14■□□□□ 0.49
CLN3-212ENST00000564574 SNTNA6NMZ2 147 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 GLCEO94923 617 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 CLDN14O95500 239 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 NPR2P20594 1047 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 SLC2A5P22732 501 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 MYF6P23409 242 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 LAP3P28838 519 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 CD79BP40259 229 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 ISL1P61371 349 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 MRPS34P82930 218 aaKnown RBP18.14■□□□□ 0.49
CLN3-212ENST00000564574 GLO1Q04760 184 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 MAD2L1BPQ15013 274 aaPredicted RBP18.14■□□□□ 0.49
CLN3-212ENST00000564574 SFRP5Q5T4F7 317 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 LCN1P1Q5VSP4 162 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 GLB1L2Q8IW92 636 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 ZNF433Q8N7K0 673 aaPredicted RBP18.14■□□□□ 0.49
CLN3-212ENST00000564574 C1orf162Q8NEQ5 155 aaPredicted RBP18.14■□□□□ 0.49
CLN3-212ENST00000564574 RFKQ969G6 155 aa18.14■□□□□ 0.49
CLN3-212ENST00000564574 UBE2FQ969M7 185 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms