RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ZC3HAV1LQ96H79 300 aaKnown RBP14.6□□□□□ -0.07
RNF40-206ENST00000564260 ERMAPQ96PL5 475 aaPredicted RBP14.6□□□□□ -0.07
RNF40-206ENST00000564260 NIPSNAP1Q9BPW8 284 aa14.6□□□□□ -0.07
RNF40-206ENST00000564260 TMEM204Q9BSN7 226 aa14.6□□□□□ -0.07
RNF40-206ENST00000564260 TBC1D23Q9NUY8 699 aa14.6□□□□□ -0.07
RNF40-206ENST00000564260 DCHS2Q6V1P9 2916 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 TMCC2O75069 709 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 IGLV1-44P01699 117 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 CBR1P16152 277 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 CDH2P19022 906 aaPredicted RBP14.59□□□□□ -0.07
RNF40-206ENST00000564260 PTDSS1P48651 473 aaKnown RBP14.59□□□□□ -0.07
RNF40-206ENST00000564260 IST1P53990 364 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 ESRRGP62508 458 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 PPP1R8Q12972 351 aaKnown RBP14.59□□□□□ -0.07
RNF40-206ENST00000564260 SLC36A2Q495M3 483 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 HIKESHIQ53FT3 197 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 HIST2H2BCQ6DN03 193 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 TMEM179BQ7Z7N9 219 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 SYT9Q86SS6 491 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 TMEM200AQ86VY9 491 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 JAZF1Q86VZ6 243 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 OR52N5Q8NH56 324 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 ZNF837Q96EG3 531 aaPredicted RBP14.59□□□□□ -0.07
RNF40-206ENST00000564260 KCNN2Q9H2S1 579 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 C1orf198Q9H425 327 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 KIF17Q9P2E2 1029 aa14.59□□□□□ -0.07
RNF40-206ENST00000564260 SETXQ7Z333 2677 aaKnown RBP14.59□□□□□ -0.07
RNF40-206ENST00000564260 PPP1R3DO95685 299 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 RENP00797 406 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 IFNGP01579 166 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 CD3EP07766 207 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 LOXP28300 417 aaPredicted RBP14.58□□□□□ -0.08
RNF40-206ENST00000564260 CENPAP49450 140 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 ERFP50548 548 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PCBD1P61457 104 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 FAM27BQ5VT28 67 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 SLC27A4Q6P1M0 643 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 DEPDC4Q8N2C3 294 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PYDC1Q8WXC3 89 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 LRTOMTQ8WZ04 291 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 STMN2Q93045 179 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PIK3IP1Q96FE7 263 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PLPPR2Q96GM1 343 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 TSSK6Q9BXA6 273 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PRRG3Q9BZD7 231 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 RACGAP1Q9H0H5 632 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 EGLN3Q9H6Z9 239 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 PAPOLBQ9NRJ5 636 aaKnown RBP14.58□□□□□ -0.08
RNF40-206ENST00000564260 B3GNT2Q9NY97 397 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 REV1Q9UBZ9 1251 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 IL20RAQ9UHF4 553 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 KLHL21Q9UJP4 597 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 RNF115Q9Y4L5 304 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 FKBP7Q9Y680 259 aa14.58□□□□□ -0.08
RNF40-206ENST00000564260 A0A096LPE4 126 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 A0A1W2PPZ6 126 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 H3BN98 237 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 H3BNX3 289 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 SIAH2O43255 324 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 KHDRBS3O75525 346 aaKnown RBP14.57□□□□□ -0.08
RNF40-206ENST00000564260 PTHP01270 115 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 TP53P04637 393 aaPredicted RBP14.57□□□□□ -0.08
RNF40-206ENST00000564260 HMGN1P05114 100 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 PRF1P14222 555 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 B4GALT1P15291 398 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 ZNF23P17027 643 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 CD40P25942 277 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 GRK5P34947 590 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 MYBPC1Q00872 1141 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 GSG1Q2KHT4 349 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 ZBTB46Q86UZ6 589 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 CDC20BQ86Y33 519 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 GLB1L2Q8IW92 636 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 RASD2Q96D21 266 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 SLC38A2Q96QD8 506 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 RBM4BQ9BQ04 359 aaKnown RBP14.57□□□□□ -0.08
RNF40-206ENST00000564260 RBM4Q9BWF3 364 aaKnown RBP14.57□□□□□ -0.08
RNF40-206ENST00000564260 SYT4Q9H2B2 425 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 S100A14Q9HCY8 104 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 UGT2A1Q9Y4X1 527 aa14.57□□□□□ -0.08
RNF40-206ENST00000564260 SOCS2O14508 198 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 SLC2A10O95528 541 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 CST2P09228 141 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 HIST1H1CP16403 213 aaKnown RBP14.56□□□□□ -0.08
RNF40-206ENST00000564260 MSR1P21757 451 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 GIPRP48546 466 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 BLVRAP53004 296 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 LSM6P62312 80 aaKnown RBP14.56□□□□□ -0.08
RNF40-206ENST00000564260 GLO1Q04760 184 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 BSPH1Q075Z2 132 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 PGGHGQ32M88 737 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 SLC36A3Q495N2 470 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 CLEC12AQ5QGZ9 265 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 KDM4DQ6B0I6 523 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 TMEM53Q6P2H8 277 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 C20orf204Q6ZNR8 217 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 OR8D4Q8NGM9 314 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 NINJ1Q92982 152 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 NABP1Q96AH0 204 aa14.56□□□□□ -0.08
RNF40-206ENST00000564260 PLA2G12AQ9BZM1 189 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms