RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KITP10721 976 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 THRBP10828 461 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 RAD52P43351 418 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 SLC6A9P48067 706 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 NME5P56597 212 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 PRSS12P56730 875 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 GALK2Q01415 458 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 RBBP4Q09028 425 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 MAD2L1Q13257 205 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-204ENST00000563739 C1DQ13901 141 aaKnown RBP8.7□□□□□ -1.02
SF3B3-204ENST00000563739 ZSCAN26Q16670 478 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 BEAN1Q3B7T3 259 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 FAM209AQ5JX71 171 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 C16orf87Q6PH81 154 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 RFPL4BQ6ZWI9 263 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 MAVSQ7Z434 540 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 UEVLDQ8IX04 471 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 PARP8Q8N3A8 854 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 CPEB3Q8NE35 698 aaKnown RBP8.7□□□□□ -1.02
SF3B3-204ENST00000563739 RAB1CQ92928 201 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 SLC38A4Q969I6 547 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 SLC25A28Q96A46 364 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 UPRTQ96BW1 309 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 MARS2Q96GW9 593 aaKnown RBP8.7□□□□□ -1.02
SF3B3-204ENST00000563739 GPA33Q99795 319 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 C12orf10Q9HB07 376 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 SLCO1B3Q9NPD5 702 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 TMEM38BQ9NVV0 291 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 AIG1Q9NVV5 245 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 KLHL21Q9UJP4 597 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 POFUT2Q9Y2G5 429 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 LOC100509620A0A075B734 347 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TRAV40A0A0B4J280 105 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TRPC5OSA6NMA1 111 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 PLPP3O14495 311 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 AKAP8O43823 692 aaKnown RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 MGRN1O60291 552 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TPST1O60507 370 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 FOXH1O75593 365 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 NDUFA7O95182 113 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 LYPD3O95274 346 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 CD55P08174 381 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 SELEP16581 610 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF81P51508 661 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 UCP2P55851 309 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 RAG2P55895 527 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 PROK1P58294 105 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 COPZ1P61923 177 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TXNL4AP83876 142 aaKnown RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 PMS2P3Q13401 168 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 GNA13Q14344 377 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 ZMYND11Q15326 602 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 DPY19L1Q2PZI1 675 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 HFEQ30201 348 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 SPATA46Q5T0L3 261 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 OLFML2AQ68BL7 652 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 OGFOD2Q6N063 350 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 RBMS3Q6XE24 437 aaKnown RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 Q6ZR03 302 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TSPYL5Q86VY4 417 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-204ENST00000563739 POU5F2Q8N7G0 328 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 LSMEM1Q8N8F7 131 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 SCAIQ8N9R8 606 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 OR6S1Q8NH40 331 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 BCAS4Q8TDM0 211 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 CCL17Q92583 94 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 ELMOD3Q96FG2 381 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 POFUT1Q9H488 388 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 CCDC134Q9H6E4 229 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 SLCO1C1Q9NYB5 712 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 P2RX2Q9UBL9 471 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 USH1CQ9Y6N9 552 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
SF3B3-204ENST00000563739 IGKV1D-43A0A0B4J1Z2 117 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 A0A0B4J2E0 115 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 A0A1B0GX12 115 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SLC22A23A1A5C7 686 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 ISPDA4D126 451 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 SPRY3O43610 288 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 OR2T1O43869 369 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 KNG1P01042 644 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 NGFP01138 241 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 THY1P04216 161 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 LCKP06239 509 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PGA4P0DJD7 388 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PGA3P0DJD8 388 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 BMP2P12643 396 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 LBPP18428 481 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
SF3B3-204ENST00000563739 EPHA3P29320 983 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 S100A3P33764 101 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 PCGF2P35227 344 aa8.68□□□□□ -1.02
SF3B3-204ENST00000563739 CSNK1A1P48729 337 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms