RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 AHCYL1O43865 530 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ENTPD5O75356 428 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 RAD51DO75771 328 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 IGHG1P01857 330 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 SLC6A6P31641 620 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
USB1-208ENST00000563207 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
USB1-208ENST00000563207 RAP1BP61224 184 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 RAP1AP62834 184 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 PPA1Q15181 289 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ARMC4Q5T2S8 1044 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 GPR139Q6DWJ6 353 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 OR7E24Q6IFN5 339 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ZNF620Q6ZNG0 422 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 TMEM179BQ7Z7N9 219 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 P2RY8Q86VZ1 359 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ZDHHC13Q8IUH4 622 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 C1orf162Q8NEQ5 155 aaPredicted RBP13.7□□□□□ -0.22
USB1-208ENST00000563207 OR52N5Q8NH56 324 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 FANK1Q8TC84 345 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ASB10Q8WXI3 467 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 LRTOMTQ8WZ04 291 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 STMN2Q93045 179 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 FBXW5Q969U6 566 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 BOD1Q96IK1 185 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 C1QTNF6Q9BXI9 259 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 OR52D1Q9H346 318 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 ESRP2Q9H6T0 727 aaKnown RBP13.7□□□□□ -0.22
USB1-208ENST00000563207 NRIP3Q9NQ35 241 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 GRHPRQ9UBQ7 328 aa13.7□□□□□ -0.22
USB1-208ENST00000563207 RNF223E7ERA6 249 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 G3V2T6 193 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 IMPA2O14732 288 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 IDH3BO43837 385 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 ACADSP16219 412 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 ACVR1BP36896 505 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 CSNK1A1P48729 337 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 FXYD6P3P58550 94 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 CAMK2DQ13557 499 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 HIST3H3Q16695 136 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 C9orf135Q5VTT2 229 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 HMBOX1Q6NT76 420 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 ARIH2OSQ8N7S6 290 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 OR6N1Q8NGY5 312 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 MRPL13Q9BYD1 178 aaKnown RBP13.69□□□□□ -0.22
USB1-208ENST00000563207 S100A14Q9HCY8 104 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 GLTPQ9NZD2 209 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
USB1-208ENST00000563207 CDH10Q9Y6N8 788 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
USB1-208ENST00000563207 CSPG4Q6UVK1 2322 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 H3BNX3 289 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ABCD4O14678 606 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ARPC3O15145 178 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 UPK3AO75631 287 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 TXNDC12O95881 172 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 PGA4P0DJD7 388 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 PGA3P0DJD8 388 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ZNF26P17031 533 aaPredicted RBP13.68□□□□□ -0.22
USB1-208ENST00000563207 PAX7P23759 505 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 SDHAP31040 664 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 CLRN1P58418 232 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 MELKQ14680 651 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 CLEC12BQ2HXU8 276 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 THSD4Q6ZMP0 1018 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 FAM122BQ7Z309 247 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 AMIGO2Q86SJ2 522 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ZNF519Q8TB69 540 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 HTRA1Q92743 480 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 TMEM54Q969K7 222 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 GTPBP3Q969Y2 492 aaKnown RBP13.68□□□□□ -0.22
USB1-208ENST00000563207 MUS81Q96NY9 551 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 MDFIQ99750 246 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 ALG12Q9BV10 488 aa13.68□□□□□ -0.22
USB1-208ENST00000563207 CISD1Q9NZ45 108 aaKnown RBP13.68□□□□□ -0.22
USB1-208ENST00000563207 FBN1P35555 2871 aaKnown RBP13.68□□□□□ -0.22
USB1-208ENST00000563207 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 OR5H1A6NKK0 313 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 XKRYO14609 159 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 MGRN1O60291 552 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 ITGA5P08648 1049 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 ZNF23P17027 643 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ZNF83P51522 516 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 ERVK-25P63136 954 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ROR2Q01974 943 aaKnown RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 TIMM23BQ5SRD1 257 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 THEM4Q5T1C6 240 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 CARD17Q5XLA6 110 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 FAHD1Q6P587 224 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 B3GLCTQ6Y288 498 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms