RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 OAFQ86UD1 273 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 LHFPL3Q86UP9 236 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 PRSS58Q8IYP2 241 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ZNF679Q8IYX0 411 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 GATSQ8NAP1 163 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ABHD3Q8WU67 409 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 LRRC58Q96CX6 371 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 RMI2Q96E14 147 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 PIK3IP1Q96FE7 263 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 MED8Q96G25 268 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 SLC41A3Q96GZ6 507 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ZNF382Q96SR6 550 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 LZTS2Q9BRK4 669 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ZSCAN5AQ9BUG6 496 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ANKRD19PQ9H560 264 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 SYNDIG1Q9H7V2 258 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 UGT1A7Q9HAW7 530 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 UGT1A10Q9HAW8 530 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 UGT1A8Q9HAW9 530 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 DDX19AQ9NUU7 478 aaKnown RBP1.57□□□□□ -2.16
CHD9-207ENST00000562806 GPATCH2LQ9NWQ4 482 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 CTSFQ9UBX1 484 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 ZNF629Q9UEG4 869 aaPredicted RBP1.57□□□□□ -2.16
CHD9-207ENST00000562806 MARCOQ9UEW3 520 aaPredicted RBP1.57□□□□□ -2.16
CHD9-207ENST00000562806 PTBP2Q9UKA9 531 aaKnown RBP1.57□□□□□ -2.16
CHD9-207ENST00000562806 ATP6V0A2Q9Y487 856 aa1.57□□□□□ -2.16
CHD9-207ENST00000562806 PIKFYVEQ9Y2I7 2098 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 IGLV3-22A0A075B6J6 115 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 IGKV1D-13A0A0B4J2D9 117 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 FAM240BA0A1B0GVZ2 78 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 SNTNA6NMZ2 147 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 ZNF726A6NNF4 738 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 FABP3P05413 133 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 ADRA2AP08913 450 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 IGKV1-13P0DP09 117 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 IFNA8P32881 189 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 NCBP2P52298 156 aaKnown RBP eCLIP1.56□□□□□ -2.16
CHD9-207ENST00000562806 CDH4P55283 916 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 PON3Q15166 354 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 IRF4Q15306 451 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 FAM78AQ5JUQ0 283 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 PRR9Q5T870 116 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 DUX4L9Q6RFH8 374 aaPredicted RBP1.56□□□□□ -2.16
CHD9-207ENST00000562806 TEX43Q6ZNM6 134 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 SLC25A48Q6ZT89 311 aaKnown RBP1.56□□□□□ -2.16
CHD9-207ENST00000562806 LINC00173Q6ZV60 143 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 RUFY3Q7L099 469 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 CALHM3Q86XJ0 350 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 PUSL1Q8N0Z8 303 aaKnown RBP1.56□□□□□ -2.16
CHD9-207ENST00000562806 STPG2Q8N412 459 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 PHF10Q8WUB8 498 aaKnown RBP1.56□□□□□ -2.16
CHD9-207ENST00000562806 SEH1LQ96EE3 360 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 NARS2Q96I59 477 aaKnown RBP1.56□□□□□ -2.16
CHD9-207ENST00000562806 PLEKHA8Q96JA3 519 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 PSKH2Q96QS6 385 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 DOK1Q99704 481 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 RARRES2Q99969 163 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 ERP44Q9BS26 406 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 SLC25A2Q9BXI2 301 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 SGK2Q9HBY8 427 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 KIAA1257Q9ULG3 409 aa1.56□□□□□ -2.16
CHD9-207ENST00000562806 KIF26AQ9ULI4 1882 aaPredicted RBP1.55□□□□□ -2.16
CHD9-207ENST00000562806 TRAV6A0A075B6T7 132 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 CIB4A0PJX0 185 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 RAD51BO15315 384 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 TIMM8AO60220 97 aaPredicted RBP1.55□□□□□ -2.16
CHD9-207ENST00000562806 MPZL1O95297 269 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 BCHEP06276 602 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 C1GALT1C1LP0DN25 315 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 CELP19835 753 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 HRH1P35367 487 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 PRPHP41219 470 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 CDKN2BP42772 138 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 IFNAR2P48551 515 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 LOXL1Q08397 574 aaPredicted RBP1.55□□□□□ -2.16
CHD9-207ENST00000562806 SYCNQ0VAF6 134 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 KRTAP13-2Q52LG2 175 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 VAX1Q5SQQ9 334 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 DNLZQ5SXM8 178 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 CCNJQ5T5M9 372 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 ANKRD22Q5VYY1 191 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 ASCL5Q7RTU5 278 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 PPP1R42Q7Z4L9 355 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 DHDDSQ86SQ9 333 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 WDR86Q86TI4 376 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 LIX1Q8N485 282 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 RHEBL1Q8TAI7 183 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 TMEM54Q969K7 222 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 FAM3DQ96BQ1 224 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 TRIM62Q9BVG3 475 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 ULBP2Q9BZM5 246 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 SPNS1Q9H2V7 528 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 VCX2Q9H322 139 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 RPF2Q9H7B2 306 aaKnown RBP1.55□□□□□ -2.16
CHD9-207ENST00000562806 UBE2ZQ9H832 354 aaPredicted RBP1.55□□□□□ -2.16
CHD9-207ENST00000562806 NT5MQ9NPB1 228 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 IKZF2Q9UKS7 526 aa1.55□□□□□ -2.16
CHD9-207ENST00000562806 OR52A4PA6NMU1 304 aa1.54□□□□□ -2.16
CHD9-207ENST00000562806 HAS3O00219 553 aa1.54□□□□□ -2.16
CHD9-207ENST00000562806 PSTPIP1O43586 416 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms