RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TUBA1AQ71U36 451 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 IGFN1Q86VF2 1251 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SYT14Q8NB59 555 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SPATA3Q8NHX4 192 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 FNDC8Q8TC99 324 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SMAP2Q8WU79 429 aaPredicted RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 TMEM171Q8WVE6 324 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 HDAC2Q92769 488 aaKnown RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 KCNK17Q96T54 332 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 KATNB1Q9BVA0 655 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 DENND2DQ9H6A0 471 aaPredicted RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 SMURF2Q9HAU4 748 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 FAIMQ9NVQ4 179 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 TMEM38BQ9NVV0 291 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 POU2F3Q9UKI9 436 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 TMCC3Q9ULS5 477 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SIGLEC7Q9Y286 467 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 STAB1Q9NY15 2570 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 USF3Q68DE3 2245 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SONP18583 2426 aaKnown RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 CADP27708 2225 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 A6NIZ1 184 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 AQP12BA6NM10 295 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 MGRN1O60291 552 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 DNAJC8O75937 253 aaPredicted RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 ATP5HO75947 161 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 NDUFB2O95178 105 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 CD14P08571 375 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 DANCRP0C864 163 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 OR8G3PP0DMU2 310 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 RPL4P36578 427 aaKnown RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 ACVR1BP36896 505 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 RASSF2P50749 326 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 ZNF84P51523 738 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 RAP1BP61224 184 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 RAP1AP62834 184 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 C10orf128Q5T292 105 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 ZER1Q7Z7L7 766 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 AQP12AQ8IXF9 295 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 SLC22A24Q8N4F4 322 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 LINC00471Q8N535 108 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 ZNF519Q8TB69 540 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 RSRC1Q96IZ7 334 aaKnown RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 TSPAN32Q96QS1 320 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 GPX7Q96SL4 187 aaPredicted RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 KCNS3Q9BQ31 491 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 CXorf56Q9H5V9 222 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 ZNF701Q9NV72 531 aaPredicted RBP14.4□□□□□ -0.1
CDT1-202ENST00000562747 B3GNT2Q9NY97 397 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 MXRA5Q9NR99 2828 aa14.4□□□□□ -0.1
CDT1-202ENST00000562747 CR1P17927 2039 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 ZNF503-AS2A6NEH8 195 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 UNC119BA6NIH7 251 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 E7EQL1 145 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 OR10H3O60404 316 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 CRLF1O75462 422 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 UBL3O95164 117 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 FARS2O95363 451 aaKnown RBP14.39□□□□□ -0.11
CDT1-202ENST00000562747 CRYAAP02489 173 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 CECR9P0C854 216 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 RAP2AP10114 183 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 ZNF26P17031 533 aaPredicted RBP14.39□□□□□ -0.11
CDT1-202ENST00000562747 HOXB6P17509 224 aaKnown RBP14.39□□□□□ -0.11
CDT1-202ENST00000562747 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 NAAAQ02083 359 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 CD47Q08722 323 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 GSG1Q2KHT4 349 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 PGGHGQ32M88 737 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 THEM4Q5T1C6 240 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 DPPA2Q7Z7J5 298 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 MDP1Q86V88 176 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 ARIH2OSQ8N7S6 290 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 MAPK1IP1LQ8NDC0 245 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 NMD3Q96D46 503 aaKnown RBP14.39□□□□□ -0.11
CDT1-202ENST00000562747 DHRS9Q9BPW9 319 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 GRIP2Q9C0E4 1043 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 ZNF224Q9NZL3 707 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 GRHPRQ9UBQ7 328 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 MOKQ9UQ07 419 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 LAMP3Q9UQV4 416 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 LYVE1Q9Y5Y7 322 aa14.39□□□□□ -0.11
CDT1-202ENST00000562747 TNFRSF11BO00300 401 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 HLA-HP01893 362 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 SOD3P08294 240 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 CD79AP11912 226 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 FPR3P25089 353 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 IDH3GP51553 393 aaPredicted RBP14.38□□□□□ -0.11
CDT1-202ENST00000562747 ERVK-25P63136 954 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 TNK1Q13470 666 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 GPR139Q6DWJ6 353 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 ZNF544Q6NX49 715 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 C1orf94Q6P1W5 598 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 B3GLCTQ6Y288 498 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 DPY19L2P2Q6ZN68 376 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 FAM122BQ7Z309 247 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 DTX2Q86UW9 622 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 SKA3Q8IX90 412 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 IL17RDQ8NFM7 739 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 GNPDA2Q8TDQ7 276 aa14.38□□□□□ -0.11
CDT1-202ENST00000562747 RBP7Q96R05 134 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms