RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 NPTX1Q15818 432 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 MOGQ16653 247 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 TSTQ16762 297 aaKnown RBP11.09□□□□□ -0.63
SF3B3-202ENST00000562722 DUSP7Q16829 419 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 LRFN4Q6PJG9 635 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 USP51Q70EK9 711 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 DHDDSQ86SQ9 333 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 PEG10Q86TG7 708 aaKnown RBP11.09□□□□□ -0.63
SF3B3-202ENST00000562722 LRRC18Q8N456 261 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 SLC26A7Q8TE54 656 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 ADAMTS16Q8TE57 1224 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 TLCD1Q96CP7 247 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 JMJD8Q96S16 334 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 CCDC28BQ9BUN5 200 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 BCL2L14Q9BZR8 327 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 KCNN2Q9H2S1 579 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 SLCO1B3Q9NPD5 702 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF229Q9UJW7 825 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 GMEB1Q9Y692 573 aa11.09□□□□□ -0.63
SF3B3-202ENST00000562722 A0A1W2PRG6 482 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 TRAPPC13A5PLN9 417 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 CLDN25C9JDP6 229 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 PLPP2O43688 288 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 PGA4P0DJD7 388 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF250P15622 560 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 CD247P20963 164 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 CRYBB2P43320 205 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 UCP2P55851 309 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 PCBP3P57721 371 aaKnown RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 MTPNP58546 118 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 HILS1P60008 231 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 HFEQ30201 348 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 MMEL1Q495T6 779 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 RUNDC3AQ59EK9 446 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 LINC00114Q6XXX2 140 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 PTOV1Q86YD1 416 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 RBM45Q8IUH3 476 aaKnown RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 BPIFB2Q8N4F0 458 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 SYT14Q8NB59 555 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 NOXO1Q8NFA2 376 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 GPR32P1Q8NGA4 272 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 OR1J1Q8NGS3 322 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 GTF3AQ92664 365 aaKnown RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 RAB1CQ92928 201 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 MCHR2Q969V1 340 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 ZMYND19Q96E35 227 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF347Q96SE7 839 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 RBM4Q9BWF3 364 aaKnown RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 SAP30LQ9HAJ7 183 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 CCNB1IP1Q9NPC3 277 aa11.08□□□□□ -0.64
SF3B3-202ENST00000562722 LEF1Q9UJU2 399 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-202ENST00000562722 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ISPDA4D126 451 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ANGPT2O15123 496 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF500O60304 480 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ERLIN1O75477 346 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SNAP29O95721 258 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 THY1P04216 161 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 F13BP05160 661 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ADRA2CP18825 462 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 GCH1P30793 250 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ATP4BP51164 291 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF81P51508 661 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 DCAF12L2Q5VW00 463 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 DLEU7Q6UYE1 221 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 USP43Q70EL4 1123 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 PATL1Q86TB9 770 aaKnown RBP11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SLC30A8Q8IWU4 369 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 FAM216AQ8WUB2 273 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 DYDC1Q8WWB3 177 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SLC6A7Q99884 636 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 GAL3ST1Q99999 423 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SUCNR1Q9BXA5 334 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 G6PC2Q9NQR9 355 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 NKIRAS2Q9NYR9 191 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 EIF3KQ9UBQ5 218 aaKnown RBP11.07□□□□□ -0.64
SF3B3-202ENST00000562722 TRIM33Q9UPN9 1127 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 NDUFAF1Q9Y375 327 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 CACNG2Q9Y698 323 aa11.07□□□□□ -0.64
SF3B3-202ENST00000562722 PLSCR5A0PG75 271 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 SPRY3O43610 288 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 AVPP01185 164 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 ASAH2BP0C7U1 165 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 DAP3P51398 398 aaKnown RBP11.06□□□□□ -0.64
SF3B3-202ENST00000562722 RPL18Q07020 188 aaKnown RBP11.06□□□□□ -0.64
SF3B3-202ENST00000562722 SELPLGQ14242 412 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 NRN1LQ496H8 165 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 PABPC1L2AQ5JQF8 200 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 C1orf229Q6ZS94 237 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms