RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SDR9C7Q8NEX9 313 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 GRK7Q8WTQ7 553 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 DCAKDQ8WVC6 231 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 IPCEF1Q8WWN9 437 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 CDKL2Q92772 493 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 DPF1Q92782 380 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CIDECQ96AQ7 238 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 CCDC126Q96EE4 140 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 NEIL1Q96FI4 390 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 ZNF75AQ96N20 296 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 SH3GL3Q99963 347 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 DESI2Q9BSY9 194 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CHID1Q9BWS9 393 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ACPTQ9BZG2 426 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 PPA2Q9H2U2 334 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 PIGUQ9H490 435 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CDH20Q9HBT6 801 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ADPRHL2Q9NX46 363 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 VPREB3Q9UKI3 123 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 GUCA1BQ9UMX6 200 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RCE1Q9Y256 329 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 GPR45Q9Y5Y3 372 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 A0A087WUV0 522 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 IGHV1-69DA0A0B4J2H0 117 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CENPVL1A0A0U1RR11 272 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CENPVL3A0A0U1RRI6 287 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 A0A1W2PRX2 142 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 M0R3G1 203 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 P2RY10O00398 339 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ZNF208O43345 1280 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ANGPTL7O43827 346 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 JTBO76095 146 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 URI1O94763 535 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 TOX4O94842 621 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 OR4F21O95013 312 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 VAMP5O95183 116 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 DUS4LO95620 317 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 IGHV1-69P01742 117 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 IGHV3-13P01766 116 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 IFNW1P05000 195 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 SERPINA5P05154 406 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 WNT2P09544 360 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CD28P10747 220 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CCL2P13500 99 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 B4GALT1P15291 398 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ZNF43P17038 809 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 EFNA1P20827 205 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 GTF2E2P29084 291 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 CRHR1P34998 444 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 SPRP35270 261 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 HTR3AP46098 478 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 IDH2P48735 452 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 POLR2HP52434 150 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 AQP5P55064 265 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CDH13P55290 713 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 PDIA2Q13087 525 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 PMS2P3Q13401 168 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 FASTKD3Q14CZ7 662 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 AP1ARQ63HQ0 302 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ANKRD26P1Q6NSI1 321 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 SLC27A4Q6P1M0 643 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 RNF130Q86XS8 419 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 KLBQ86Z14 1044 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 EPHX4Q8IUS5 362 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CTAGE3PQ8IX95 158 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 PDZD9Q8IXQ8 264 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 CENPLQ8N0S6 344 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 PAQR4Q8N4S7 273 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 FITM2Q8N6M3 262 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 SLC30A7Q8NEW0 376 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 OR2T6Q8NHC8 308 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 DDB2Q92466 427 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 LHX4Q969G2 390 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 FAM120BQ96EK7 910 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 C3orf30Q96M34 536 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 PRPF18Q99633 342 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 CITED2Q99967 270 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 TAPBPLQ9BX59 468 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 RNF121Q9H920 327 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ZCCHC3Q9NUD5 404 aaKnown RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 EXD2Q9NVH0 621 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 OSGIN1Q9UJX0 560 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 FBXL3Q9UKT7 428 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 FAF1Q9UNN5 650 aaPredicted RBP4.37□□□□□ -1.71
HERC1-213ENST00000561359 POFUT2Q9Y2G5 429 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 KCNE3Q9Y6H6 103 aa4.37□□□□□ -1.71
HERC1-213ENST00000561359 ZSCAN5BA6NJL1 495 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 STX16-NPEPL1H3BU86 382 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 STX16O14662 325 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 RAD51CO43502 376 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 ENSAO43768 121 aaKnown RBP4.36□□□□□ -1.71
HERC1-213ENST00000561359 SMIM24O75264 130 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 UBL3O95164 117 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 CHRM2P08172 466 aa4.36□□□□□ -1.71
HERC1-213ENST00000561359 PATE4P0C8F1 98 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms