RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NSMAFQ92636 917 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 NABP1Q96AH0 204 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 CCL19Q99731 98 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 NRIP3Q9NQ35 241 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 IER3IP1Q9Y5U9 82 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 MAGED1Q9Y5V3 778 aaPredicted RBP12.07□□□□□ -0.48
TPM1-230ENST00000561266 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
TPM1-230ENST00000561266 ACANP16112 2415 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 TEX13CA0A0J9YWL9 993 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 SLC22A23A1A5C7 686 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 PPP1R3DO95685 299 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 TP53P04637 393 aaPredicted RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 RAP2AP10114 183 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 ZNF14P17017 642 aaPredicted RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 FPR3P25089 353 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 CDKN2AP42771 156 aaKnown RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 CAPZA2P47755 286 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 GIPRP48546 466 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 CD47Q08722 323 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 NPRL3Q12980 569 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 FLOT2Q14254 428 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 TAF11Q15544 211 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 SSX8Q7RTT4 187 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 FAM169BQ8N8A8 192 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 FBXW5Q969U6 566 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 GTPBP3Q969Y2 492 aaKnown RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 GPX7Q96SL4 187 aaPredicted RBP12.06□□□□□ -0.48
TPM1-230ENST00000561266 ALG12Q9BV10 488 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 TRIM15Q9C019 465 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 OR52D1Q9H346 318 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 EGLN3Q9H6Z9 239 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
TPM1-230ENST00000561266 CHD3Q12873 2000 aaKnown RBP12.05□□□□□ -0.48
TPM1-230ENST00000561266 IGHV2OR16-5A0A0B4J2B6 119 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 DHRS12A0PJE2 317 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 OVOL3O00110 214 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 SOCS2O14508 198 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 NDUFS7O75251 213 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 KRT36O76013 467 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
TPM1-230ENST00000561266 CDKN1AP38936 164 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 PTDSS1P48651 473 aaKnown RBP12.05□□□□□ -0.48
TPM1-230ENST00000561266 RAB1AP62820 205 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 ADAM8P78325 824 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 TSPAN31Q12999 210 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 RAB39AQ14964 217 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 MST1LQ2TV78 715 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 RFX4Q33E94 735 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 UGT2A3Q6UWM9 527 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 SPATA24Q86W54 205 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 HS3ST5Q8IZT8 346 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 LRRC18Q8N456 261 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 WFDC11Q8NEX6 87 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 GNPDA2Q8TDQ7 276 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 TRAF4Q9BUZ4 470 aaPredicted RBP12.05□□□□□ -0.48
TPM1-230ENST00000561266 BEX4Q9NWD9 120 aaPredicted RBP12.05□□□□□ -0.48
TPM1-230ENST00000561266 TMCC3Q9ULS5 477 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
TPM1-230ENST00000561266 DCTN6O00399 190 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 MGRN1O60291 552 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 CCNB2O95067 398 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 GPANK1O95872 356 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 TXNDC12O95881 172 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 CST1P01037 141 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 OR8G3PP0DMU2 310 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 CTLA4P16410 223 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 MRPS34P82930 218 aaKnown RBP12.04□□□□□ -0.48
TPM1-230ENST00000561266 CBX1P83916 185 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 KRR1Q13601 381 aaKnown RBP12.04□□□□□ -0.48
TPM1-230ENST00000561266 CCNIQ14094 377 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 SGCAQ16586 387 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 MICAQ29983 383 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 GSG1Q2KHT4 349 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 C1QTNF12Q5T7M4 302 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 ZNF620Q6ZNG0 422 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 FOXL2NBQ6ZUU3 175 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 ASRGL1Q7L266 308 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 PAQR4Q8N4S7 273 aaPredicted RBP12.04□□□□□ -0.48
TPM1-230ENST00000561266 PAPD5Q8NDF8 572 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms