RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SPATA31D1Q6ZQQ2 1576 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ELP1O95163 1332 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MROH7Q68CQ1 1323 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 EVC2Q86UK5 1308 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4-4A0A075B6R2 117 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 A0A087X1B8 175 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TEX48A0A1B0GUV7 120 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FAM231BA6NCW3 169 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SYCE1LA8MT33 242 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF724A8MTY0 619 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MKRN2OSH3BPM6 223 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 KLRC4-KLRK1H3BQV0 150 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 M0QZ92 97 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 DFFAO00273 331 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SOCS2O14508 198 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF749O43361 778 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SGCEO43556 437 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CYTH3O43739 400 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ALOX12BO75342 701 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLC2A10O95528 541 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RAB3DO95716 219 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RAB36O95755 333 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PAK4O96013 591 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 GCGP01275 180 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 IGHG4P01861 327 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HLA-DRAP01903 254 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CATP04040 527 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RLN2P04090 185 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 IFNA6P05013 189 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ARG1P05089 322 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 GPIP06744 558 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CD55P08174 381 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RPS17P08708 135 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 ACAA1P09110 424 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR8U9P0C7N5 309 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FRMD6-AS1P0C7T7 363 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HSPD1P10809 573 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 PSG1P11464 419 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PVRP15151 417 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF250P15622 560 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TCP1P17987 556 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 CSNK2A2P19784 350 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 CNR1P21554 472 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PRKACGP22612 351 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CMA1P23946 247 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HLA-DMAP28067 261 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 NTSP30990 170 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HOXA6P31267 233 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PRKAR2BP31323 418 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RPA3P35244 121 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 GCKP35557 465 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 BTDP43251 543 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLCO1A2P46721 670 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TFPI2P48307 235 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HSPA13P48723 471 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CSNK1A1P48729 337 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 VSX2P58304 361 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RPL10AP62906 217 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 PAFAH1B2P68402 229 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SRPXP78539 464 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PRKCDQ05655 676 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF33BQ06732 778 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 C2orf80Q0P641 193 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 Q0VFX4 171 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TCP10Q12799 353 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLAMF1Q13291 335 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 NFATC4Q14934 902 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLC10A1Q14973 349 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 P2RY6Q15077 328 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TRIP13Q15645 432 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 EXOC3L4Q17RC7 722 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 KIAA1644Q3SXP7 199 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLC36A2Q495M3 483 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 COX19Q49B96 90 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CARD16Q5EG05 197 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CPTPQ5TA50 214 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 BSPRYQ5W0U4 402 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FAM219BQ5XKK7 198 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OLFML2AQ68BL7 652 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HBMQ6B0K9 141 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SPOPLQ6IQ16 392 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FAM45BPQ6NSW5 357 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FAM199XQ6PEV8 388 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RBMS3Q6XE24 437 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 CCDC121Q6ZUS5 278 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MRPL52Q86TS9 123 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 OAFQ86UD1 273 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 AKAP14Q86UN6 197 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 NT5DC3Q86UY8 548 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HORMAD1Q86X24 394 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 C10orf107Q8IVU9 208 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CADM2Q8N3J6 435 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 Q8N402 240 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CBR4Q8N4T8 237 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TMEM251Q8N6I4 163 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PRELID2Q8N945 189 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CDRT4Q8N9R6 151 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 WDR31Q8NA23 367 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF740Q8NDX6 193 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms