RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MDFIQ99750 246 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 MUC13Q9H3R2 512 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 YAE1D1Q9NRH1 226 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 ATRQ13535 2644 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 A0A1W2PRQ8 180 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 TMEM129A0AVI4 362 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 A6NIZ1 184 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 B9A039 149 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 TLX2O43763 284 aaPredicted RBP13.79□□□□□ -0.2
LMX1B-204ENST00000561065 UBL3O95164 117 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 PTHP01270 115 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 TP53P04637 393 aaPredicted RBP13.79□□□□□ -0.2
LMX1B-204ENST00000561065 PGA4P0DJD7 388 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 PGA3P0DJD8 388 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 OR8G3PP0DMU2 310 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 CD79AP11912 226 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 FUT4P22083 530 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 IFNGR2P38484 337 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 PPOXP50336 477 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 RAP1BP61224 184 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 RAP1AP62834 184 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 VLDLRP98155 873 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 PIGFQ07326 219 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 SNTB2Q13425 540 aaKnown RBP13.79□□□□□ -0.2
LMX1B-204ENST00000561065 DGCR6Q14129 220 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 GSG1Q2KHT4 349 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 NRN1LQ496H8 165 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 NRMQ8IXM6 262 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 SVOPLQ8N434 492 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 FITM2Q8N6M3 262 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 RNF148Q8N7C7 305 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF347Q96SE7 839 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 TXNIPQ9H3M7 391 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 C20orf141Q9NUB4 165 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
LMX1B-204ENST00000561065 hCG_2039718K7EN88 272 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 DHHO43323 396 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 RAB36O95755 333 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 F13BP05160 661 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 QDPRP09417 244 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 CSF3P09919 207 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 PATE4P0C8F1 98 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 IGHV4-31P0DP07 118 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 ACADSP16219 412 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF16P17020 682 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-204ENST00000561065 AQP2P41181 271 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMX1B-204ENST00000561065 RUNX1T1Q06455 604 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 TMPRSS11FQ6ZWK6 438 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF584Q8IVC4 421 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 ZCCHC24Q8N2G6 241 aaKnown RBP13.78□□□□□ -0.2
LMX1B-204ENST00000561065 DOK1Q99704 481 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 VRK1Q99986 396 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-204ENST00000561065 RHCGQ9UBD6 479 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 FKBP7Q9Y680 259 aa13.78□□□□□ -0.2
LMX1B-204ENST00000561065 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMX1B-204ENST00000561065 AHCYL1O43865 530 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 TSPAN19P0C672 248 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 NPR2P20594 1047 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 RPL4P36578 427 aaKnown RBP13.77□□□□□ -0.21
LMX1B-204ENST00000561065 GIPRP48546 466 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 PTDSS1P48651 473 aaKnown RBP13.77□□□□□ -0.21
LMX1B-204ENST00000561065 RPL27P61353 136 aaKnown RBP13.77□□□□□ -0.21
LMX1B-204ENST00000561065 DAG1Q14118 895 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 FXNQ16595 210 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 SLC36A2Q495M3 483 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 FGD3Q5JSP0 725 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 THEM4Q5T1C6 240 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 TMEM53Q6P2H8 277 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 LRFN4Q6PJG9 635 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 SKA3Q8IX90 412 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 ALG12Q9BV10 488 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 C1orf21Q9H246 121 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 LRMDAQ9H2I8 198 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 C1orf198Q9H425 327 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 SMURF2Q9HAU4 748 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 NDUFAF4Q9P032 175 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
LMX1B-204ENST00000561065 A0A087WUU8 490 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-204ENST00000561065 J3KTA2 159 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 XKRYO14609 159 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 FFAR1O14842 300 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 KRT36O76013 467 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 FABP3P05413 133 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-204ENST00000561065 ZNF35P13682 527 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 HOXB6P17509 224 aaKnown RBP13.76□□□□□ -0.21
LMX1B-204ENST00000561065 NR4A2P43354 598 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 PDLIM4P50479 330 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 CTXN1P60606 82 aa13.76□□□□□ -0.21
LMX1B-204ENST00000561065 RAB1AP62820 205 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms