RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MUC20Q8N307 709 aaPredicted RBP3.04□□□□□ -1.92
HERC1-211ENST00000560983 GPR119Q8TDV5 335 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 TRPC4APQ8TEL6 797 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 ANKRD49Q8WVL7 239 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 RAB40AQ8WXH6 277 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 PMM1Q92871 262 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 NEURL3Q96EH8 262 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 ZNF75AQ96N20 296 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 ZNF317Q96PQ6 595 aaPredicted RBP3.04□□□□□ -1.92
HERC1-211ENST00000560983 OR5B2Q96R09 309 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 RHOXF2Q9BQY4 288 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 CENPKQ9BS16 269 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 CHID1Q9BWS9 393 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 LAT2Q9GZY6 243 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 CRLF2Q9HC73 371 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 HINT3Q9NQE9 182 aaKnown RBP3.04□□□□□ -1.92
HERC1-211ENST00000560983 C20orf96Q9NUD7 363 aaPredicted RBP3.04□□□□□ -1.92
HERC1-211ENST00000560983 ACOXLQ9NUZ1 547 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 TAS2R9Q9NYW1 312 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 TAAR3PQ9P1P4 343 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 UBE2J1Q9Y385 318 aaPredicted RBP3.04□□□□□ -1.92
HERC1-211ENST00000560983 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
HERC1-211ENST00000560983 IGHV2-70DA0A0C4DH43 119 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ISPDA4D126 451 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 DPPA5A6NC42 116 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 H0YIV9 168 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 SULT2B1O00204 365 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 UPK1AO00322 258 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 RSL1D1O76021 490 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 DUS4LO95620 317 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 WNT2P09544 360 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 UROSP10746 265 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF14P17017 642 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 GABRA3P34903 492 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ARR3P36575 388 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 MAP3K8P41279 467 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 MAGEA8P43361 318 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ENTPD1P49961 510 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 RWDD2BP57060 319 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 FGF12P61328 243 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 UBE2HP62256 183 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 SLC35A2P78381 396 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 RPL36AP83881 106 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 GALK2Q01415 458 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF117Q03924 483 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 GALNT1Q10472 559 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF155Q12901 538 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 SELENBP1Q13228 472 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 SLC17A1Q14916 467 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 TSTQ16762 297 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 CCNYL2Q5T2Q4 361 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 GPR157Q5UAW9 335 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ARMC3Q5W041 872 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 SULT1C3Q6IMI6 304 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 C11orf63Q6NUN7 778 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 BTNL3Q6UXE8 466 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 CASP12Q6UXS9 341 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 MDP1Q86V88 176 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 COMTD1Q86VU5 262 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 MISPQ8IVT2 679 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 POMGNT2Q8NAT1 580 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 PIK3R3Q92569 461 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 TMEM45BQ96B21 275 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 KLHL29Q96CT2 875 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 DNAJA3Q96EY1 480 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 AURKBQ96GD4 344 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF385AQ96PM9 386 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 CHP1Q99653 195 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 LMF2Q9BU23 707 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 FRMD8P1Q9BZ68 369 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 TSGA10Q9BZW7 698 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 DPAGT1Q9H3H5 408 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 KRCC1Q9NPI7 259 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 B3GNT2Q9NY97 397 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 PAK5Q9P286 719 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 OR5V1Q9UGF6 321 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 VPREB3Q9UKI3 123 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF346Q9UL40 294 aaKnown RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 PSME2Q9UL46 239 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 C19orf53Q9UNZ5 99 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 TFR2Q9UP52 801 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 CORO2BQ9UQ03 480 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 SNX13Q9Y5W8 968 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 NPTNQ9Y639 398 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 ZNF780BQ9Y6R6 833 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 MYCBP2O75592 4640 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 TET2Q6N021 2002 aaPredicted RBP3.03□□□□□ -1.92
HERC1-211ENST00000560983 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
HERC1-211ENST00000560983 IGLV3-9A0A075B6K5 115 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 A0A087WV62 115 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 A0A1W2PPW3 197 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 A0A1W2PQD3 144 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 PRSS47A8MTI9 375 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 H0YHG0 523 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 UPK3AO75631 287 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 SEMA3DO95025 777 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 WISP3O95389 354 aaPredicted RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 IGKV3-20P01619 116 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 GYPCP04921 128 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms