RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ADAM18Q9Y3Q7 739 aa4.84□□□□□ -1.63
ZEB1-220ENST00000560909 IER3IP1Q9Y5U9 82 aa4.84□□□□□ -1.63
ZEB1-220ENST00000560909 UBR5O95071 2799 aaPredicted RBP4.84□□□□□ -1.63
ZEB1-220ENST00000560909 RELNP78509 3460 aa4.84□□□□□ -1.64
ZEB1-220ENST00000560909 ADGRG4Q8IZF6 3080 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 HELZ2Q9BYK8 2649 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SPTBN1Q01082 2364 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 IGLV1-36A0A0B4J1U3 117 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 IGHV3-15A0A0B4J1V0 119 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TEX13CA0A0J9YWL9 993 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 A0A1W2PRG6 482 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SLC22A23A1A5C7 686 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 H3BN98 237 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ZNHIT1O43257 154 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PRKYO43930 277 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MPZL2O60487 215 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TRMUO75648 421 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 BCL10O95999 233 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TPOP07202 933 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PGA4P0DJD7 388 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PGA3P0DJD8 388 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ACADSP16219 412 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RAB6AP20340 208 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 AHCYP23526 432 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 POU1F1P28069 291 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 GTF2E2P29084 291 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 AGTR1P30556 359 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RPL4P36578 427 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SLC15A1P46059 708 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 OR3A2P47893 321 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 CDC42P60953 191 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 CXCR4P61073 352 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ID3Q02535 119 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 POU3F1Q03052 451 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RBPJQ06330 500 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 CD47Q08722 323 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ITGADQ13349 1161 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TMED1Q13445 227 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 KRR1Q13601 381 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 C1DQ13901 141 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ESPL1Q14674 2120 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MAD2L1BPQ15013 274 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MESTQ5EB52 335 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 CLEC12AQ5QGZ9 265 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 C10orf128Q5T292 105 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 C6orf52Q5T4I8 152 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 LINC01590Q5TEZ4 76 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 LRFN4Q6PJG9 635 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SLC25A47Q6Q0C1 308 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SEZ6L2Q6UXD5 910 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RPTNQ6XPR3 784 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 B3GNT6Q6ZMB0 384 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TUSC5Q8IXB3 177 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ENTHD1Q8IYW4 607 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 IQCF1Q8N6M8 205 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SLC37A3Q8NCC5 494 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SETD9Q8NE22 299 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ZNF555Q8NEP9 628 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 OR6K3Q8NGY3 331 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TMEM163Q8TC26 289 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 APH1BQ8WW43 257 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 HDAC2Q92769 488 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 UBE2FQ969M7 185 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RASD2Q96D21 266 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 ERMAPQ96PL5 475 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SLC38A2Q96QD8 506 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 APOL4Q9BPW4 351 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TEX12Q9BXU0 123 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 YTHDF1Q9BYJ9 559 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PRRG3Q9BZD7 231 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MARCH7Q9H992 704 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 HINT3Q9NQE9 182 aaKnown RBP4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PLCXD1Q9NUJ7 323 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TBC1D23Q9NUY8 699 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 PARPBPQ9NWS1 579 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MED29Q9NX70 200 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 TVP23BQ9NYZ1 205 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 UBAP1Q9NZ09 502 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 JKAMPQ9P055 326 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 EMC3Q9P0I2 261 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 GRHPRQ9UBQ7 328 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 MALT1Q9UDY8 824 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 IL20RAQ9UHF4 553 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 RNF6Q9Y252 685 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 GMPPBQ9Y5P6 360 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 FKBP7Q9Y680 259 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 KIAA1549Q9HCM3 1950 aa4.83□□□□□ -1.64
ZEB1-220ENST00000560909 SH3D21A4FU49 640 aa4.82□□□□□ -1.64
ZEB1-220ENST00000560909 RIIAD1A6NNX1 92 aa4.82□□□□□ -1.64
ZEB1-220ENST00000560909 C11orf98E9PRG8 122 aa4.82□□□□□ -1.64
ZEB1-220ENST00000560909 J3QRE1 110 aa4.82□□□□□ -1.64
ZEB1-220ENST00000560909 M0R3G1 203 aa4.82□□□□□ -1.64
ZEB1-220ENST00000560909 DCTN6O00399 190 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms