RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CLDN24A6NM45 220 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 SLC28A1O00337 649 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 FAAHO00519 579 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 AIM2O14862 343 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PLIN3O60664 434 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 TRIM13O60858 407 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 FARS2O95363 451 aaKnown RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 SNAP29O95721 258 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 TFPTP0C1Z6 253 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 IMPDH1P20839 514 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ALDH3A1P30838 453 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 AQP5P55064 265 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 FOXA1P55317 472 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PAX2Q02962 417 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PLP2Q04941 152 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 BNIP2Q12982 314 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CHI3L2Q15782 390 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 GPAT3Q53EU6 434 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CASC10Q5T4H9 136 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ATG16L1Q676U5 607 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CLEC6AQ6EIG7 209 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 MEPCEQ7L2J0 689 aaKnown RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 ZNF627Q7L945 461 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 HMGN2P46Q86SG4 172 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 LSRQ86X29 649 aaPredicted RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 PTOV1Q86YD1 416 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 LDLRAD3Q86YD5 345 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ZNF584Q8IVC4 421 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 C20orf196Q8IYI0 205 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 MIER2Q8N344 545 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CADM2Q8N3J6 435 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PAQR4Q8N4S7 273 aaPredicted RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 OR6N1Q8NGY5 312 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PSMA8Q8TAA3 256 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CFHR4Q92496 578 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 CNOT9Q92600 299 aaKnown RBP7.95□□□□□ -1.14
HERC1-210ENST00000560897 DPY30Q9C005 99 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 PALMDQ9NP74 551 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 A4GALTQ9NPC4 353 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 DCAF16Q9NXF7 216 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ZNF224Q9NZL3 707 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 FBLN5Q9UBX5 448 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 MIOXQ9UGB7 285 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 BAIAP2L1Q9UHR4 511 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ATP6V1HQ9UI12 483 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 VPREB3Q9UKI3 123 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 WI2-2373I1.2A0A1W2PRP0 233 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 TMEM120BA0PK00 339 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 H3BQF6 201 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ENSAO43768 121 aaKnown RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 MGRN1O60291 552 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ICMTO60725 284 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 MFN2O95140 757 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 CHEK2O96017 543 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 CD55P08174 381 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ADH4P08319 380 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 WNT2P09544 360 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 PATE4P0C8F1 98 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 IGLL1P15814 213 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 CCNOP22674 350 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 PRPH2P23942 346 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 APLNRP35414 380 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 MMP15P51511 669 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 EPS8Q12929 822 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 KIAA0040Q15053 153 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 PHYHD1Q5SRE7 291 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 SLC27A4Q6P1M0 643 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ZYG11AQ6WRX3 759 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 C6orf120Q7Z4R8 191 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 KLBQ86Z14 1044 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 UEVLDQ8IX04 471 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ZNF440Q8IYI8 595 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 TMEM123Q8N131 208 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 LYG1Q8N1E2 194 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 FITM2Q8N6M3 262 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 KLHDC1Q8N7A1 406 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 ZNF283Q8N7M2 679 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 OR7A2PQ8NGA2 310 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 MFSD8Q8NHS3 518 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 MZB1Q8WU39 189 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 XAGE5Q8WWM1 108 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 IPCEF1Q8WWN9 437 aaPredicted RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 NEIL1Q96FI4 390 aaPredicted RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 LRR1Q96L50 414 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 OR51I1Q9H343 314 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 INTS9Q9NV88 658 aaKnown RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 MKS1Q9NXB0 559 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 EIF3KQ9UBQ5 218 aaKnown RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 CLN8Q9UBY8 286 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 FOXJ3Q9UPW0 622 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 CAB39Q9Y376 341 aaPredicted RBP7.94□□□□□ -1.14
HERC1-210ENST00000560897 TMED5Q9Y3A6 229 aa7.94□□□□□ -1.14
HERC1-210ENST00000560897 RNF103-CHMP3A0A140T963 221 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 ZNF726A6NNF4 738 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 TMEM114B3SHH9 223 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 RNASEK-C17orf49H0YIS7 233 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 BIRC5O15392 142 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 FBXO24O75426 580 aa7.93□□□□□ -1.14
HERC1-210ENST00000560897 SASH3O75995 380 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms