RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SLC22A31A6NKX4 558 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 PTGES3LE9PB15 166 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 MS4A18H0YCH9 400 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 LY6G6DO95868 133 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 TXNDC12O95881 172 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 IGHG1P01857 330 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 HEXAP06865 529 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 TSPAN19P0C672 248 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 IFNGR1P15260 489 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 CTSSP25774 331 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 SHC1P29353 583 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 CRABP1P29762 137 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 CLDN18P56856 261 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 CLRN1P58418 232 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 NKX6-1P78426 367 aaPredicted RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 SORDQ00796 357 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 RASGEF1BQ0VAM2 473 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 KRR1Q13601 381 aaKnown RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 ZNF239Q16600 458 aaKnown RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 MS4A18Q3C1V0 323 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 KLHL12Q53G59 568 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 ARMC4Q5T2S8 1044 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 LCN1P1Q5VSP4 162 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 EEF1A1P5Q5VTE0 462 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 PLBD1Q6P4A8 553 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 LEG1Q6P5S2 330 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 FCRLAQ7L513 359 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 GGNQ86UU5 652 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 CXorf67Q86X51 503 aaPredicted RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 CPOQ8IVL8 374 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 STX19Q8N4C7 294 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 C9orf106Q8NAJ2 232 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 ZNF540Q8NDQ6 660 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 OR2T4Q8NH00 348 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 OR4K13Q8NH42 304 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 MBD3L2Q8NHZ7 208 aaPredicted RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 ZNF566Q969W8 418 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 INTS12Q96CB8 462 aaKnown RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 WDYHV1Q96HA8 205 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 MDFIQ99750 246 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 FANCFQ9NPI8 374 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 B3GAT2Q9NPZ5 323 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 GLRX2Q9NS18 164 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 BEX4Q9NWD9 120 aaPredicted RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 JKAMPQ9P055 326 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 SCOCQ9UIL1 159 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 ZNF346Q9UL40 294 aaKnown RBP10.44□□□□□ -0.74
LDLR-212ENST00000560467 ADAM18Q9Y3Q7 739 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 ZNF175Q9Y473 711 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 PCDHGB1Q9Y5G3 927 aa10.44□□□□□ -0.74
LDLR-212ENST00000560467 STAB1Q9NY15 2570 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 EXPH5Q8NEV8 1989 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 A0A087WXM4 84 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR6C65A6NJZ3 312 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 SLC22A20A6NK97 555 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 CENPBD1B2RD01 187 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 PRODHO43272 600 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 PRKYO43930 277 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 KRT33AO76009 404 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 FADS2O95864 444 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 IGHMP01871 453 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 HIST1H1CP16403 213 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 OPRM1P35372 400 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 SUCLG1P53597 346 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 CDH11P55287 796 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 BIDP55957 195 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 H3F3AP84243 136 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 POU4F2Q12837 409 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 FOXF2Q12947 444 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 KCTD21Q4G0X4 260 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 Q5PR19 223 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 NXNL2Q5VZ03 156 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR2A2Q6IF42 318 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 UGT2A3Q6UWM9 527 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 PLXDC2Q6UX71 529 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 CCDC103Q8IW40 242 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 CIARTQ8N365 385 aaPredicted RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 KDM8Q8N371 416 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 LRRC75AQ8NAA5 344 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 SLC37A3Q8NCC5 494 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR9K2Q8NGE7 335 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR6N1Q8NGY5 312 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR6X1Q8NH79 312 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 CNIH3Q8TBE1 160 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 ZPLD1Q8TCW7 415 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 MRPL48Q96GC5 212 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 SLC25A44Q96H78 314 aaPredicted RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 Q96M85 177 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 SNX18Q96RF0 628 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 RBM24Q9BX46 236 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 CCDC90BQ9GZT6 254 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 OR51V1Q9H2C8 321 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 RERGLQ9H628 205 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 PLCXD1Q9NUJ7 323 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 GALNT8Q9NY28 637 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 ZNF226Q9NYT6 803 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 UBAP1Q9NZ09 502 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 WARS2Q9UGM6 360 aaKnown RBP10.43□□□□□ -0.74
LDLR-212ENST00000560467 MOKQ9UQ07 419 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms