RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ACTA2P62736 377 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ACTG2P63267 376 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 RUNX1T1Q06455 604 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ACSM1Q08AH1 577 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 MED22Q15528 200 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TIGD6Q17RP2 521 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 LINC00303Q3SY05 128 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TEX30Q5JUR7 227 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 C10orf128Q5T292 105 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SLC25A47Q6Q0C1 308 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 FAM180AQ6UWF9 173 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SHFQ7M4L6 423 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 AAED1Q7RTV5 226 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 KCTD20Q7Z5Y7 419 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ADGRE4PQ86SQ3 457 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 LHFPL3Q86UP9 236 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ERI1Q8IV48 349 aaKnown RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 GLB1L2Q8IW92 636 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 RP1L1Q8IWN7 2480 aaPredicted RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SLC35F2Q8IXU6 374 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TIGD4Q8IY51 512 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TMEM123Q8N131 208 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 GHDCQ8N2G8 530 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZIC4Q8N9L1 334 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 KDF1Q8NAX2 398 aaPredicted RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SYT14Q8NB59 555 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 OR10H4Q8NGA5 316 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 OR51L1Q8NGJ5 315 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF420Q8TAQ5 688 aaPredicted RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 HAVCR2Q8TDQ0 301 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ROBO4Q8WZ75 1007 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TMEM54Q969K7 222 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 TMIGD2Q96BF3 282 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 NMD3Q96D46 503 aaKnown RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF845Q96IR2 970 aaPredicted RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 COG8Q96MW5 612 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF385AQ96PM9 386 aaKnown RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 OR2M2Q96R28 347 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 INTS14Q96SY0 518 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ZNF649Q9BS31 505 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 ALG8Q9BVK2 526 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 RERGLQ9H628 205 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 BCO1Q9HAY6 547 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 B3GAT2Q9NPZ5 323 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 GLRX2Q9NS18 164 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 GLTPQ9NZD2 209 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 CAMK2AQ9UQM7 478 aa7.65□□□□□ -1.18
TRAF3-209ENST00000560463 LSM2Q9Y333 95 aaKnown RBP7.65□□□□□ -1.18
TRAF3-209ENST00000560463 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.19
TRAF3-209ENST00000560463 SLC22A20A6NK97 555 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 HSPB2A8KAH6 182 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 AHRRA9YTQ3 701 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF670-ZNF695F2Z2N8 137 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 TMCC2O75069 709 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 AQP8O94778 261 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 INMTO95050 263 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 APOL3O95236 402 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 HLA-DQA2P01906 255 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 SCG5P05408 212 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 LCKP06239 509 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 YES1P07947 543 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ADRA2AP08913 450 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 MRPL3P09001 348 aaKnown RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 QDPRP09417 244 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 SFTPCP11686 197 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF823P16415 610 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 PSMB9P28065 219 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 LAP3P28838 519 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 PTGS2P35354 604 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 GUCA1AP43080 201 aaPredicted RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ENTPD1P49961 510 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 BDH1Q02338 343 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 FMODQ06828 376 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 MLLT11Q13015 90 aaPredicted RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 STK11Q15831 433 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 HSPB2Q16082 182 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 KCNMB1Q16558 191 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ARMCX4Q5H9R4 360 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 RIPPLY2Q5TAB7 128 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 KCTD18Q6PI47 426 aaPredicted RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 B3GLCTQ6Y288 498 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 PLEKHG7Q6ZR37 379 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 CDC20BQ86Y33 519 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 MCEMP1Q8IX19 187 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 C20orf196Q8IYI0 205 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 SYS1Q8N2H4 156 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF511Q8NB15 262 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 ZNF485Q8NCK3 441 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 OR6N1Q8NGY5 312 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 FNDC9Q8TBE3 224 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 MCHR2Q969V1 340 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 DGCR14Q96DF8 476 aaKnown RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 GPR137Q96N19 417 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 MGLLQ99685 303 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 BCL7BQ9BQE9 202 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 RBM38Q9H0Z9 239 aaKnown RBP7.64□□□□□ -1.19
TRAF3-209ENST00000560463 WDR76Q9H967 626 aa7.64□□□□□ -1.19
TRAF3-209ENST00000560463 CALHM2Q9HA72 323 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms